| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g18220.1 |
| Family | CBM43 |
| Protein Properties | Length: 486 Molecular Weight: 51374.1 Isoelectric Point: 4.5287 |
| Chromosome | Chromosome/Scaffold: 3 Start: 16644000 End: 16648092 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 368 | 449 | 5.2e-27 |
| WCVLKPDADLADQKVGDSVSYACGNADCTSLGYKTSCAGLDARGNVSYAFNSYYQHDDQDDRACDFDGLATTTTVDPSAGTC | |||
| GH17 | 26 | 345 | 0 |
| VGVNWGTQLSHPLAASTMVQLLKDNGFDKVKLFDAEEEALAALRGSGIQVMVGIPNDMLAGLAASGKAAEDWVAANVSKHVSDGVDIRLVTVGNEPFLET FNGTYLNTTFPAMQSVQVALAKAGLSNRVKVTVALNADVYQSASGKPSNGDFRADILGLMLSIVSFLASNGAPFVANVYPFISLYADANFPLDYAFFQGS SSPVVDDNGVTYQNTFDASHDTLAAALSRNGFGNVSIVVGEVGWPTDGDANANLQLARQFNQGLLTRIASGKGTPLRPGSAIDAYLFSLVDEDQKSIQPG NFERHWGLFYYDGKPKYPLT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 486 Download |
| MAAAAVSLLL MLLPALCMMP WPAAAVGVNW GTQLSHPLAA STMVQLLKDN GFDKVKLFDA 60 EEEALAALRG SGIQVMVGIP NDMLAGLAAS GKAAEDWVAA NVSKHVSDGV DIRLVTVGNE 120 PFLETFNGTY LNTTFPAMQS VQVALAKAGL SNRVKVTVAL NADVYQSASG KPSNGDFRAD 180 ILGLMLSIVS FLASNGAPFV ANVYPFISLY ADANFPLDYA FFQGSSSPVV DDNGVTYQNT 240 FDASHDTLAA ALSRNGFGNV SIVVGEVGWP TDGDANANLQ LARQFNQGLL TRIASGKGTP 300 LRPGSAIDAY LFSLVDEDQK SIQPGNFERH WGLFYYDGKP KYPLTLRGDG DGSFLLPARG 360 VAYLSRRWCV LKPDADLADQ KVGDSVSYAC GNADCTSLGY KTSCAGLDAR GNVSYAFNSY 420 YQHDDQDDRA CDFDGLATTT TVDPSAGTCR FIVEIAPTSA AAAPARDVAG RVAFLLVSFL 480 LLCVL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-5 | 258 | 337 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-16 | 367 | 438 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-30 | 368 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-81 | 26 | 345 | 322 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ06041.1 | 0 | 17 | 468 | 21 | 473 | hypothetical protein OsI_28283 [Oryza sativa Indica Group] |
| RefSeq | NP_001045844.1 | 0 | 25 | 468 | 31 | 469 | Os02g0139300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001061277.1 | 0 | 17 | 459 | 21 | 464 | Os08g0224500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151032.1 | 0 | 29 | 460 | 36 | 465 | glucan endo-1,3-beta-glucosidase 6 [Zea mays] |
| RefSeq | XP_002445228.1 | 0 | 24 | 464 | 32 | 469 | hypothetical protein SORBIDRAFT_07g006340 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 26 | 346 | 1 | 306 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
| PDB | 1aq0_B | 0 | 26 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 26 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 0 | 26 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 26 | 346 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
