Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi3g57610.1 |
Family | CBM43 |
Protein Properties | Length: 496 Molecular Weight: 51278.9 Isoelectric Point: 8.0803 |
Chromosome | Chromosome/Scaffold: 3 Start: 57324607 End: 57327516 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 407 | 490 | 3.7e-32 |
WCVANAMAGEARLHAALDYACGPGGADCKAIQPGAACFEPNTMVSHASYAFNDYYQRKGRSIGTCDFAGAAYVVNQAPKMGKCE | |||
GH17 | 30 | 353 | 0 |
VGVNWGRVANDLPSPASVVSLLKQHGITQVKLYDTEPAVLRALANTGVKVIVALPNEQVAAAARRPSYALAWVRRNVAAYYPATQIQGVAVGNEVFATAG NVTAQLVPAMANIHAALQRLNLDKAVKVSSPIALTALASSYPPSAGVFREELAQAVMKPMLDFLSQTGSYLMVNAYPFFAYAENAGVISLDYALFRPNAG ELDAGSGLKYYSLLDAQLDAVFAAVGKLGGNAYNGVRLVVSETGWPSKGDAKETGAAASNAEAYNGNLVRRVLSGNAGTPRRGDADIDVYLFALFNENQK PGPTSERNYGVFYPNQQKVYDVEF |
Full Sequence |
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Protein Sequence Length: 496 Download |
MAHPSARLLF AAAAALSLLF FFSTSEAGTV GVNWGRVAND LPSPASVVSL LKQHGITQVK 60 LYDTEPAVLR ALANTGVKVI VALPNEQVAA AARRPSYALA WVRRNVAAYY PATQIQGVAV 120 GNEVFATAGN VTAQLVPAMA NIHAALQRLN LDKAVKVSSP IALTALASSY PPSAGVFREE 180 LAQAVMKPML DFLSQTGSYL MVNAYPFFAY AENAGVISLD YALFRPNAGE LDAGSGLKYY 240 SLLDAQLDAV FAAVGKLGGN AYNGVRLVVS ETGWPSKGDA KETGAAASNA EAYNGNLVRR 300 VLSGNAGTPR RGDADIDVYL FALFNENQKP GPTSERNYGV FYPNQQKVYD VEFVLGGGGG 360 VGAGGKGSKG NGGGGGLGWQ DDGRNGNGAA PSGVPAGVKV GAPGEAWCVA NAMAGEARLH 420 AALDYACGPG GADCKAIQPG AACFEPNTMV SHASYAFNDY YQRKGRSIGT CDFAGAAYVV 480 NQAPKMGKCE LPSTV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 45 | 344 | 313 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-20 | 407 | 478 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-36 | 407 | 489 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-103 | 30 | 353 | 324 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79018.1 | 0 | 23 | 495 | 22 | 481 | unknown [Zea mays] |
GenBank | ACF88240.1 | 0 | 20 | 495 | 19 | 481 | unknown [Zea mays] |
RefSeq | NP_001048260.1 | 0 | 1 | 495 | 1 | 488 | Os02g0771700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001136613.1 | 0 | 20 | 495 | 19 | 481 | hypothetical protein LOC100216736 [Zea mays] |
RefSeq | XP_002454630.1 | 0 | 7 | 495 | 6 | 491 | hypothetical protein SORBIDRAFT_04g034530 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 30 | 353 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 30 | 353 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 30 | 353 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 30 | 353 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 30 | 353 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |