Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi4g15460.1 |
Family | CBM43 |
Protein Properties | Length: 500 Molecular Weight: 52747.8 Isoelectric Point: 5.4361 |
Chromosome | Chromosome/Scaffold: 4 Start: 16155615 End: 16157504 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 456 | 1.7e-23 |
WCVLNTNSTNVSNETALADNVGYACSRADCTALGFGCSCGTLDAAGNASYAFNVYYQAQGQVDSACDFQGLAVVTHEDASRGACN | |||
GH17 | 20 | 348 | 0 |
LGVNWGTMATRRLPPKTMARLLRDNGFSKVKIFDADESTMSGLAGTGIEAMIAVPNDLLAAVSDFDGARKWVRANVTKYAFRGGVNIKFVAVGNEPFLKA YNGTYDNVTVPALKNIQRALNEAGHGASVKATVPVNADVYDSPPDNPVPSAGAFRADIAGVMADMVAFLNHSGAPFSVNIYPFLSLYGNDDFPLDYAFFD PGNGTGPAPNPVVDAANGINYTNVFDANFDTLVSALKRIGFGDLPVVIGEVGWPTDGDKHATVPYAERFYAGLLKRIASGRGTPLRPKARIEVYLFGLMD EDAKSVAPGNFERHWGIFTFDGRPKFPLD |
Full Sequence |
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Protein Sequence Length: 500 Download |
MAALIRCAAL VILVGLAEGL GVNWGTMATR RLPPKTMARL LRDNGFSKVK IFDADESTMS 60 GLAGTGIEAM IAVPNDLLAA VSDFDGARKW VRANVTKYAF RGGVNIKFVA VGNEPFLKAY 120 NGTYDNVTVP ALKNIQRALN EAGHGASVKA TVPVNADVYD SPPDNPVPSA GAFRADIAGV 180 MADMVAFLNH SGAPFSVNIY PFLSLYGNDD FPLDYAFFDP GNGTGPAPNP VVDAANGINY 240 TNVFDANFDT LVSALKRIGF GDLPVVIGEV GWPTDGDKHA TVPYAERFYA GLLKRIASGR 300 GTPLRPKARI EVYLFGLMDE DAKSVAPGNF ERHWGIFTFD GRPKFPLDLG LHGGTPAMPK 360 PARGVHYLPR RWCVLNTNST NVSNETALAD NVGYACSRAD CTALGFGCSC GTLDAAGNAS 420 YAFNVYYQAQ GQVDSACDFQ GLAVVTHEDA SRGACNFTVQ VAGESLGTTA VNATSAAPPV 480 AAWEWVAGVL AALLLLVSD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 261 | 340 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-17 | 371 | 444 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-27 | 372 | 457 | 88 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-66 | 20 | 348 | 331 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA94484.1 | 0 | 23 | 457 | 30 | 458 | Glucan endo-1,3-beta-glucosidase 5 precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY81406.1 | 0 | 23 | 458 | 32 | 461 | hypothetical protein OsI_36575 [Oryza sativa Indica Group] |
GenBank | EAZ18823.1 | 0 | 23 | 457 | 30 | 458 | hypothetical protein OsJ_34360 [Oryza sativa Japonica Group] |
RefSeq | NP_001140660.1 | 0 | 20 | 464 | 27 | 461 | hypothetical protein LOC100272735 [Zea mays] |
RefSeq | XP_002449743.1 | 0 | 23 | 464 | 29 | 472 | hypothetical protein SORBIDRAFT_05g022490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 1.4013e-45 | 20 | 350 | 2 | 316 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3f55_C | 1.4013e-45 | 20 | 350 | 2 | 316 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3f55_B | 1.4013e-45 | 20 | 350 | 2 | 316 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3f55_A | 1.4013e-45 | 20 | 350 | 2 | 316 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3em5_D | 1.4013e-45 | 20 | 350 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |