| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi4g34390.1 |
| Family | CBM43 |
| Protein Properties | Length: 478 Molecular Weight: 51586.8 Isoelectric Point: 8.586 |
| Chromosome | Chromosome/Scaffold: 4 Start: 40012089 End: 40015975 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 385 | 471 | 1.8e-28 |
| WCVLATHGRKLNETAVGDALTYACGQGNGTCDAVQPGGECFQPNTGEAHASYAFNSYWQQFRKIGATCYFNNLAEQTIKDPSHGSCK | |||
| GH17 | 35 | 358 | 0 |
| LGVNYGRVADDIPSPRRSVQLLRAAGAGSVKIYDANPAVLRALAGTRIPVSIMVPNEIIPDLAASAAKADEWVVQNLLPYLAKTRVKFLLVGNEVLSDRS IATSTWPRIVPAMENLHRSLRARRVSSVKLGTTLAMDALVSGAFPRPPSAAVFRADIAEAVVRPLLRFLNGTNSYYFVDAYPYFAWAGNNETVPLDYALF QGGSRYVDPGTGLTYTNLLDEMLDAVGAAMSKLGHGEVRLAIAETGWPNGGDYDQIGGNARNAAVYNRNLAARMARNPGTPARPGAKMPVFVFSLYNENL KPGPGTERHWGLYYPDGTEVYQID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 478 Download |
| MASIPIPPLL LLLLFGVFAA FACHVVDGSR TPHGLGVNYG RVADDIPSPR RSVQLLRAAG 60 AGSVKIYDAN PAVLRALAGT RIPVSIMVPN EIIPDLAASA AKADEWVVQN LLPYLAKTRV 120 KFLLVGNEVL SDRSIATSTW PRIVPAMENL HRSLRARRVS SVKLGTTLAM DALVSGAFPR 180 PPSAAVFRAD IAEAVVRPLL RFLNGTNSYY FVDAYPYFAW AGNNETVPLD YALFQGGSRY 240 VDPGTGLTYT NLLDEMLDAV GAAMSKLGHG EVRLAIAETG WPNGGDYDQI GGNARNAAVY 300 NRNLAARMAR NPGTPARPGA KMPVFVFSLY NENLKPGPGT ERHWGLYYPD GTEVYQIDLT 360 GRRPLWAYPP LPAPENNTPY KGPIWCVLAT HGRKLNETAV GDALTYACGQ GNGTCDAVQP 420 GGECFQPNTG EAHASYAFNS YWQQFRKIGA TCYFNNLAEQ TIKDPSHGSC KFHSSLG* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-17 | 385 | 458 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-34 | 385 | 472 | 88 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-99 | 35 | 358 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC84834.1 | 0 | 13 | 476 | 7 | 476 | hypothetical protein OsI_31928 [Oryza sativa Indica Group] |
| RefSeq | NP_001063586.1 | 0 | 13 | 476 | 7 | 479 | Os09g0502200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149815.1 | 0 | 28 | 477 | 26 | 477 | glucan endo-1,3-beta-glucosidase A6 [Zea mays] |
| RefSeq | XP_002444717.1 | 0 | 23 | 476 | 37 | 483 | hypothetical protein SORBIDRAFT_07g026540 [Sorghum bicolor] |
| RefSeq | XP_002462618.1 | 0 | 22 | 476 | 24 | 480 | hypothetical protein SORBIDRAFT_02g029080 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 35 | 359 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 35 | 359 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 35 | 359 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 35 | 359 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 35 | 359 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
