| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi5g12137.1 |
| Family | CBM43 |
| Protein Properties | Length: 474 Molecular Weight: 50862.1 Isoelectric Point: 8.5306 |
| Chromosome | Chromosome/Scaffold: 5 Start: 15613229 End: 15615123 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 382 | 465 | 4e-22 |
| WCMTKKLANGTAVREQVAAACKDEAALCDPVRPGGRCHLPDTVAAHASYVFSAHWNRFSKQYGGWCYFAGLAVETTIDPSHGSC | |||
| GH17 | 31 | 354 | 0 |
| LGVSYGTLGDDLPPPHVALELARSAGAAAVRFYDSNATLLAAASSSGLGFVPGVPNELIPSLSASRRAADAWVASTLLPFRRNPRLRYLFVGNEVLSDPT TKSRWSQLVPAMANLHRALRRHGLGRVKVSTTLGMDALVGQNVFPPSAGVFRPDIVDVAVRPLLAFLERTESYLFVDTYTYFTWTANHTVVPLPYALLEA SKFRYHDPGTGLSYTNLLDHMLDAVVAAMCGAGHCGVKLALAETGWPNAGDLDQFGANVRNAATYNRNVARHLASGAGTPRRPGMMRMPAFVFALFNEDL KGGPGTERHWGLFYPNSSAVYEVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 474 Download |
| MTMSPSIVVV ALNLLLFLAD AALATEPAHF LGVSYGTLGD DLPPPHVALE LARSAGAAAV 60 RFYDSNATLL AAASSSGLGF VPGVPNELIP SLSASRRAAD AWVASTLLPF RRNPRLRYLF 120 VGNEVLSDPT TKSRWSQLVP AMANLHRALR RHGLGRVKVS TTLGMDALVG QNVFPPSAGV 180 FRPDIVDVAV RPLLAFLERT ESYLFVDTYT YFTWTANHTV VPLPYALLEA SKFRYHDPGT 240 GLSYTNLLDH MLDAVVAAMC GAGHCGVKLA LAETGWPNAG DLDQFGANVR NAATYNRNVA 300 RHLASGAGTP RRPGMMRMPA FVFALFNEDL KGGPGTERHW GLFYPNSSAV YEVDLSGRRT 360 AASSYPPLPP ATNDAPYPGK LWCMTKKLAN GTAVREQVAA ACKDEAALCD PVRPGGRCHL 420 PDTVAAHASY VFSAHWNRFS KQYGGWCYFA GLAVETTIDP SHGSCRYPSV IPG* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 255 | 346 | 97 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-6 | 381 | 454 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-24 | 381 | 467 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-72 | 31 | 354 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC76519.1 | 0 | 12 | 472 | 8 | 473 | hypothetical protein OsI_14305 [Oryza sativa Indica Group] |
| GenBank | EEC84834.1 | 0 | 9 | 471 | 4 | 476 | hypothetical protein OsI_31928 [Oryza sativa Indica Group] |
| RefSeq | NP_001051879.1 | 0 | 12 | 472 | 8 | 473 | Os03g0845600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001063586.1 | 0 | 9 | 471 | 4 | 479 | Os09g0502200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002463526.1 | 0 | 12 | 471 | 5 | 481 | hypothetical protein SORBIDRAFT_01g001430 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 31 | 355 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 31 | 355 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 31 | 355 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 31 | 355 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1ghs_B | 0 | 31 | 355 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
