Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi5g26467.1 |
Family | CBM43 |
Protein Properties | Length: 477 Molecular Weight: 48872.2 Isoelectric Point: 5.2419 |
Chromosome | Chromosome/Scaffold: 5 Start: 27452401 End: 27454155 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 387 | 474 | 2.4e-27 |
WCVPKPAADVVALQDNIDFACGQGGGGVGVDCGEIRPGGSCYEPDTVEGHAAYAMNLYFRSSGGHEFDCEFGHTGAITTVDPSFGSCK | |||
GH17 | 20 | 354 | 0 |
IGVVYGRRATRLPPPSSVARFLARGTVFNRVRLRNADPVAVRAFAGTGLAVDVTVPNKLLPRLAASQASARRWVRANVALHVAAGVNVSRILVGHEVASQ TDVALALALAPAMENLHAALLGAGAGAGAVEVSTAHSLSVLATSSPPSAGKFSAAAETVMKPVLAFLRATGAPFMVNAYPYYALTGAGDDDGNNNDTRAL DFALFRGSSIAAGVMDPGTGLLYTNALDAELDAAHAAMARLGFGDGVDLAVAETGWPSAGEDWEPAAGAGAASLAAEYNRNAVRHLGSGVGTPLMPGRAF EVSICSLFDEDLRPGPVSERRFGLFRADDFSPVYD |
Full Sequence |
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Protein Sequence Length: 477 Download |
MLATILLLLL SITVADGASI GVVYGRRATR LPPPSSVARF LARGTVFNRV RLRNADPVAV 60 RAFAGTGLAV DVTVPNKLLP RLAASQASAR RWVRANVALH VAAGVNVSRI LVGHEVASQT 120 DVALALALAP AMENLHAALL GAGAGAGAVE VSTAHSLSVL ATSSPPSAGK FSAAAETVMK 180 PVLAFLRATG APFMVNAYPY YALTGAGDDD GNNNDTRALD FALFRGSSIA AGVMDPGTGL 240 LYTNALDAEL DAAHAAMARL GFGDGVDLAV AETGWPSAGE DWEPAAGAGA ASLAAEYNRN 300 AVRHLGSGVG TPLMPGRAFE VSICSLFDED LRPGPVSERR FGLFRADDFS PVYDAGILSA 360 AAAAPEVSVK VTPAPETNTT KGGQRQWCVP KPAADVVALQ DNIDFACGQG GGGVGVDCGE 420 IRPGGSCYEP DTVEGHAAYA MNLYFRSSGG HEFDCEFGHT GAITTVDPSF GSCKFT* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-9 | 386 | 461 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-29 | 386 | 475 | 90 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-56 | 20 | 354 | 335 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ86292.1 | 0 | 16 | 476 | 774 | 1216 | H0124B04.9 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC78268.1 | 0 | 16 | 476 | 470 | 912 | hypothetical protein OsI_17962 [Oryza sativa Indica Group] |
GenBank | EEE61922.1 | 0 | 16 | 476 | 470 | 892 | hypothetical protein OsJ_16662 [Oryza sativa Japonica Group] |
RefSeq | NP_001151529.1 | 0 | 11 | 475 | 20 | 449 | LOC100285163 [Zea mays] |
RefSeq | XP_002448791.1 | 0 | 10 | 475 | 21 | 463 | hypothetical protein SORBIDRAFT_06g033250 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 20 | 354 | 1 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 1.99965e-42 | 20 | 347 | 1 | 297 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 1.99965e-42 | 20 | 347 | 1 | 297 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 1.99965e-42 | 20 | 347 | 1 | 297 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 5.99994e-41 | 20 | 344 | 2 | 303 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |