| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10016770m |
| Family | GH35 |
| Protein Properties | Length: 688 Molecular Weight: 77266.8 Isoelectric Point: 8.1587 |
| Chromosome | Chromosome/Scaffold: 5 Start: 9716252 End: 9722214 |
| Description | beta-galactosidase 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 144 | 299 | 0 |
| ENEYGPMQWEMGAPGKAYSKWTAEMALGLSTGVPWIMCKQEDAPYPIIDTCNGFYCEGFKPNSDKKPKLWTENWTGWFTEFGGPIPNRPVEDIAFSVARF IHNGGSLMNYYMYYGGTNFDRTAGVFIATSYDYDAPIDEYGLPREPKYSHLKELHK | |||
| Full Sequence |
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| Protein Sequence Length: 688 Download |
| MGLHFREKAW ILLAILCFSS LVYSTEAVVT YDQKSLIING QRRILLSGSI HYPRSTPEMW 60 PDLLRKAKEG GLDVIQTYVF WNGHEPSPGN GISGLAQICP WYSFQNRQWT FQDCNAKIHK 120 EDCGYDESRK AVSDSRRSHH SLTENEYGPM QWEMGAPGKA YSKWTAEMAL GLSTGVPWIM 180 CKQEDAPYPI IDTCNGFYCE GFKPNSDKKP KLWTENWTGW FTEFGGPIPN RPVEDIAFSV 240 ARFIHNGGSL MNYYMYYGGT NFDRTAGVFI ATSYDYDAPI DEYGLPREPK YSHLKELHKV 300 IKMCEPTLVS VDPTITSLGN KQEAHVFKSR TSCAAFLSNY DTIHPARVIF RGFPYDLPPW 360 SISILPDCKT EYHNTAKIRV PSILMKMVPT STRFSWKSYK EGIPSSNEVG TFAKDGLVEQ 420 ISMTRDKTDY FWYLTDITIS PDEKFVKTGD DPLLTICSAG HALHVFVNGQ LSGTSYGALS 480 NSKLTFSQKI KLRVGINKLA LLSTAVGLPN AGVHYETWNT GVLGPATLNG VNSGTWDMSK 540 WKWSYKIGTR GEALSLHTLT GSSSVEWIEG SFMANKQPLT WYKSSFDTPV GNEPLALDMN 600 TMGKGQIWVN GHNIGRHWPA YTARGNCGRC NYAGIYNEKK CLSHCGEPSQ RWYHVPRSWL 660 KPYGNLVVVF EEWGGDPSGI SLVKRTA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 4.0e-7 | 29 | 89 | 62 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-28 | 35 | 89 | 55 | + Glycosyl hydrolases family 35. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-57 | 144 | 301 | 174 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 11 | 686 | 720 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK96780.1 | 0 | 1 | 686 | 1 | 724 | beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CAB39679.1 | 0 | 1 | 687 | 1 | 728 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_190852.2 | 0 | 1 | 687 | 1 | 726 | BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | NP_849553.1 | 0 | 1 | 687 | 1 | 727 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
| Swiss-Prot | Q9LFA6 | 0 | 1 | 687 | 1 | 726 | BGAL2_ARATH RecName: Full=Beta-galactosidase 2; Short=Lactase 2; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 6e-16 | 25 | 297 | 4 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.00000000000005 | 33 | 297 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.00000000000005 | 33 | 297 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Transmembrane Domains | |||||
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| Start | End | ||||
| 9 | 31 | ||||
| Signal Peptide | |||||
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| Cleavage Site | |||||
| 27 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO778160 | 720 | 13 | 686 | 0 |
| HO780602 | 555 | 141 | 686 | 0 |
| HO795552 | 462 | 141 | 601 | 0 |
| HO795552 | 149 | 22 | 133 | 3e-28 |
| HO780602 | 86 | 91 | 176 | 0.00002 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Linum usitatissimum | Lus10025110.157.313 | Lus10025110.157.313 | Lus10023974 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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