| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10022232m |
| Family | CE8 |
| Protein Properties | Length: 141 Molecular Weight: 15572.5 Isoelectric Point: 10.1701 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6967522 End: 6968053 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 1 | 120 | 2.10055e-42 |
| KCHLHSLSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGSTYLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKQNTVYYGEYKCYGPGADRGQRVK WSKQLSDDEATVFLSKNFIG | |||
| Full Sequence |
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| Protein Sequence Length: 141 Download |
| KCHLHSLSPN NGSITAQMRT SATEKSGFTF LGCKLTGSGS TYLGRPWGAY SRVVFAYSFF 60 SNVVAPQGWN QWGDSTKQNT VYYGEYKCYG PGADRGQRVK WSKQLSDDEA TVFLSKNFIG 120 GKDWLRPTPS HFKIAPKSKL * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 3.0e-40 | 11 | 127 | 117 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 2.0e-43 | 2 | 126 | 125 | + pectinesterase | ||
| PLN02665 | PLN02665 | 8.0e-46 | 3 | 130 | 130 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 5.0e-56 | 1 | 127 | 127 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 9.0e-81 | 1 | 126 | 126 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 0 | 1 | 132 | 201 | 332 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI37658.1 | 0 | 1 | 132 | 219 | 350 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_179755.1 | 0 | 1 | 137 | 208 | 344 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002280496.1 | 0 | 1 | 132 | 162 | 293 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305435.1 | 0 | 1 | 133 | 183 | 315 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3e-19 | 2 | 134 | 170 | 317 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-18 | 1 | 128 | 165 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX283718 | 136 | 1 | 136 | 0 |
| EX278581 | 136 | 1 | 136 | 0 |
| AM839785 | 134 | 1 | 133 | 0 |
| GE594095 | 121 | 14 | 133 | 0 |
| CA022603 | 125 | 2 | 126 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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