| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10024030m |
| Family | GH9 |
| Protein Properties | Length: 344 Molecular Weight: 38063.6 Isoelectric Point: 9.7425 |
| Chromosome | Chromosome/Scaffold: 3 Start: 50898700 End: 50900533 |
| Description | glycosyl hydrolase 9B9 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 32 | 318 | 1.68156e-44 |
| TSYTNQLLAHAKQLFQFARNYPGLHQNSIPVIDKFYSSTRYEDELLLATAWLHRATNDRTYLNYLVSTGKTGGTRSLFAWDDKYVGAQVLAGRLVFEGQG SSGGDNNNNNNKSSTGASSRSSSTGTLLLPQYKSQAEQFIWSCVQEGNNNNNLQKTPGGLLWFQPWIKLQYAATATFVVTVCSNYLTAAHASIQCSGGLV QPSDLMDLARSQADYILRKNPKEMSYTRRINRINQDRQDSTPVARQGGFDLWFNSKAPNPNVLDGAVVGGPDENDGYTDSRGNFQFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 344 Download |
| MERNNLRKTK TQIVGRFLDG LHPKIKRSSQ LTSYTNQLLA HAKQLFQFAR NYPGLHQNSI 60 PVIDKFYSST RYEDELLLAT AWLHRATNDR TYLNYLVSTG KTGGTRSLFA WDDKYVGAQV 120 LAGRLVFEGQ GSSGGDNNNN NNKSSTGASS RSSSTGTLLL PQYKSQAEQF IWSCVQEGNN 180 NNNLQKTPGG LLWFQPWIKL QYAATATFVV TVCSNYLTAA HASIQCSGGL VQPSDLMDLA 240 RSQADYILRK NPKEMSYTRR INRINQDRQD STPVARQGGF DLWFNSKAPN PNVLDGAVVG 300 GPDENDGYTD SRGNFQFAKP CHLLLHQHQH PLVVVGVSAS LAS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02420 | PLN02420 | 3.0e-62 | 34 | 321 | 305 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-64 | 33 | 316 | 298 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 3.0e-73 | 33 | 320 | 305 | + endoglucanase | ||
| PLN02340 | PLN02340 | 2.0e-79 | 32 | 320 | 305 | + endoglucanase | ||
| PLN00119 | PLN00119 | 5.0e-114 | 33 | 320 | 300 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM14961.1 | 0 | 47 | 316 | 1 | 257 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_181982.1 | 0 | 33 | 320 | 201 | 475 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181983.1 | 0 | 33 | 320 | 201 | 474 | AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181984.1 | 0 | 33 | 316 | 201 | 471 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181985.1 | 0 | 32 | 320 | 200 | 476 | AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 3e-31 | 33 | 315 | 172 | 408 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1ksc_A | 3e-31 | 33 | 315 | 172 | 408 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1ks8_A | 3e-31 | 33 | 315 | 172 | 408 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 1e-18 | 33 | 315 | 173 | 420 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 1e-18 | 33 | 315 | 173 | 420 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| GT742042 | 305 | 34 | 321 | 0 |
| DY968162 | 288 | 32 | 303 | 0 |
| EX680399 | 297 | 33 | 312 | 0 |
| FG181353 | 230 | 102 | 319 | 0 |
| DR691236 | 230 | 33 | 257 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |