| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10033912m |
| Family | CBM49 |
| Protein Properties | Length: 662 Molecular Weight: 73474.5 Isoelectric Point: 6.1644 |
| Chromosome | Chromosome/Scaffold: 4 Start: 18758379 End: 18762611 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM49 | 569 | 648 | 4.1e-29 |
| VEFLHSIASTWNVGETTYYKHKVIIKNTSQKPITDLKLTIENLSGSLWGLSPTSENRTYQLPPWLKVLKPGSQCTFVYVQ | |||
| GH9 | 95 | 555 | 0 |
| NYAEALDKTFLFFEAQRSGKLPENQRVKWRGDSGLKDGSLQGVDLVGGYYDAGDHVKFGLPAAFTVTMLAWGTIEYRKEITELNQMGHALWAIRWGTDYF MKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPREAFKLDQYHPGSDLAGETAAALAASAIAFKPYNSSYSELLLLHAKQLFSFADRFRGLYDDSIKCAK QFYTSSGYSDDLLWAATWLYRATNEECYLKYVVDNAEYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEGRGGAYTATLKQYKAKADYFACACVQKNAGYN VHLTPGGLMYVREWNNMQYASAAAFLLSVYYDYLSAANAKLNCPDGQIQPQQLFDFAKSQADYILGKNPNSMSYLVGYGPKYPVHVHHRGSSIASVYNLD SPVGCVQGFETWYRRNEGNPNVLHGALVGGPDQNDKFTEDRSNYEQTEPTLTACAPLVGLF | |||
| Full Sequence |
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| Protein Sequence Length: 662 Download |
| MLTTTTNSGN TDKILFTEYS VVEGQKSGAL PLSQATRQER IRSVDPAVQA EADKCGAGII 60 GVLNEFLEYS CAFRIVQQHF PDPPSQAAAD AAEYNYAEAL DKTFLFFEAQ RSGKLPENQR 120 VKWRGDSGLK DGSLQGVDLV GGYYDAGDHV KFGLPAAFTV TMLAWGTIEY RKEITELNQM 180 GHALWAIRWG TDYFMKAHTQ PNVLWAQVGD GDSDHYCWER AEDMTTPREA FKLDQYHPGS 240 DLAGETAAAL AASAIAFKPY NSSYSELLLL HAKQLFSFAD RFRGLYDDSI KCAKQFYTSS 300 GYSDDLLWAA TWLYRATNEE CYLKYVVDNA EYMGGTGWAV KEFSWDNKYA GVQILLSKVL 360 MEGRGGAYTA TLKQYKAKAD YFACACVQKN AGYNVHLTPG GLMYVREWNN MQYASAAAFL 420 LSVYYDYLSA ANAKLNCPDG QIQPQQLFDF AKSQADYILG KNPNSMSYLV GYGPKYPVHV 480 HHRGSSIASV YNLDSPVGCV QGFETWYRRN EGNPNVLHGA LVGGPDQNDK FTEDRSNYEQ 540 TEPTLTACAP LVGLFSKLQG SSKTSENPVE FLHSIASTWN VGETTYYKHK VIIKNTSQKP 600 ITDLKLTIEN LSGSLWGLSP TSENRTYQLP PWLKVLKPGS QCTFVYVQGG PQAKVSVLSY 660 N* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 100 | 661 | 580 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 100 | 660 | 595 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 100 | 558 | 461 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 100 | 558 | 459 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 100 | 556 | 459 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 88 | 661 | 22 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 94 | 661 | 29 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 100 | 661 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 91 | 661 | 23 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 87 | 661 | 20 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 94 | 554 | 3 | 431 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1ksc_A | 0 | 94 | 554 | 3 | 431 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 1ks8_A | 0 | 94 | 554 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 94 | 600 | 4 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 94 | 600 | 4 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY968162 | 271 | 257 | 527 | 0 |
| HO783495 | 375 | 100 | 473 | 0 |
| DY287831 | 358 | 100 | 452 | 0 |
| DY274365 | 364 | 100 | 459 | 0 |
| DY276095 | 309 | 141 | 447 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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