y
Basic Information | |
---|---|
Species | Chlamydomonas reinhardtii |
Cazyme ID | Cre01.g044100.t1.2 |
Family | GH14 |
Protein Properties | Length: 1338 Molecular Weight: 134324 Isoelectric Point: 6.5438 |
Chromosome | Chromosome/Scaffold: 1 Start: 6163594 End: 6169953 |
Description | beta-amylase 6 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 1048 | 1166 | 4.99997e-41 |
YGATGMHLALKIAGIHWWYRSRSHAAELTAGYYNVDGHDGYEAIVNLCARHRANLVLTCVEMCDSQHPAQAQCGPEGLLRQLRQLAARAGVQLSGENALP IFSSGGVDNDALDRIVNNM | |||
GH14 | 93 | 373 | 0 |
YCMLPLDTVNSEGVFRYAGSAWFAQALQLLVASGAHGVAMDFWWGAVERSPGQYNWSGYKQALEVIKQTGLKVQVVLSFHACGGNVGDTVQIPLPDWVVQ CAEADPDLFFADRPRNGGLGNRNREYLSIWADDAPGVLRGRSPMQCYEEYMVSLRENFSQELGTVIDEVVVGAGPCGELRLPSYVEANGWRFPGAGEFQC YDRRALASLAQAAREAGHPEWGYTGPHDAGEYNSTPEHTGFFSHNGSWNTPYGRFFLEWYSGCLLKHGDRLLTVANAVFAS |
Full Sequence |
---|
Protein Sequence Length: 1338 Download |
MSSENILLDR ALSVQGPGYG YLHLGGVYGD CVATTALGYR AAAPSMPASA SVPSFGQSGV 60 LRPHPRRYSQ NAFGTSLSPV HGPSDGGTGA NVYCMLPLDT VNSEGVFRYA GSAWFAQALQ 120 LLVASGAHGV AMDFWWGAVE RSPGQYNWSG YKQALEVIKQ TGLKVQVVLS FHACGGNVGD 180 TVQIPLPDWV VQCAEADPDL FFADRPRNGG LGNRNREYLS IWADDAPGVL RGRSPMQCYE 240 EYMVSLRENF SQELGTVIDE VVVGAGPCGE LRLPSYVEAN GWRFPGAGEF QCYDRRALAS 300 LAQAAREAGH PEWGYTGPHD AGEYNSTPEH TGFFSHNGSW NTPYGRFFLE WYSGCLLKHG 360 DRLLTVANAV FASKLNPPPQ PPQSLLQTLG AAGSALAAQL QQVAQQTVGS LGHGSSGGNA 420 MGNGAGSGPS SSHGVQAFLS PMAPGGMNSY VTNTPFQPMS FMGLHTSQTS SGGPRMSTHS 480 LNRILETGGS CGSRPGSGHA SGNELTGSAS ADGGGMPPPP APPLPRRQAT EGMLSSCGVP 540 SSISPCCTYS SMSTYTGTSS GGASGSTANM IMATAGSSGS LMSPRSMSVF HGTACGAPHS 600 EAHGAVGAAA AAGTVLGGRR SSGGGAAGSP QNASGVFSAA MNAMVTRGVA TAAALMQAAA 660 AQGGAATSMA ATNARAVAAA CGSSSRTSSD SAAATNVGTT GAAALASGDA TMIDVEPSDN 720 SHTSTVAELM NAQGLSGSSN ASGPLAHPLN AAAQPGTLAP TAVTAAASGA IVAAPGAGHA 780 SCHPSPLSGV RFRSSASTLA DAEPMFGSGQ GTAFAAVAAA GVIIASGHTA RMDLCNSLSS 840 LSTEFTTTGA TNGAGNIASM HYLDVAASLV ADGDDESDVG TSCCTAGAAE EADELFLGAG 900 NSAGRTPHPS ISEHAAALSL VPVAGRPLHH GQSAGTSSGS SGGGLQAQLQ QLQPPHGARM 960 AGIYSDDGRR SSAELSGMGL GVATLGVGMS TASAGTAVIS GVGGVGGVAA AATNPVTALL 1020 SPTTSYHTAG TAPALATSSG GGAGAALYGA TGMHLALKIA GIHWWYRSRS HAAELTAGYY 1080 NVDGHDGYEA IVNLCARHRA NLVLTCVEMC DSQHPAQAQC GPEGLLRQLR QLAARAGVQL 1140 SGENALPIFS SGGVDNDALD RIVNNMRSWP MPNNNVNSRV GISPAPSMVM PSGNGNGNGN 1200 GNGNGNGAHA SSGGNIVCVG YRMSESGRMV PVGTAASAVV NANGNGSGNG NGYGLNGASG 1260 SQSAAESGSQ INGQPTSAVT PHGSTDLNGA YSTCLSPAPP EVLPSLRAFT FLRLVPEMLL 1320 PGYQSLWMRF MGKLLAS* 1380 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 2.0e-19 | 1055 | 1147 | 93 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 9.0e-22 | 1055 | 1153 | 99 | + beta-amylase | ||
PLN02801 | PLN02801 | 8.0e-90 | 92 | 372 | 284 | + beta-amylase | ||
PLN00197 | PLN00197 | 8.0e-91 | 80 | 371 | 296 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 4.0e-96 | 77 | 371 | 297 | + beta-amylase |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001690188.1 | 0 | 132 | 366 | 1 | 235 | beta-amylase [Chlamydomonas reinhardtii] |
RefSeq | XP_001690188.1 | 0 | 1053 | 1146 | 253 | 346 | beta-amylase [Chlamydomonas reinhardtii] |
RefSeq | XP_001690188.1 | 3e-24 | 1262 | 1337 | 331 | 399 | beta-amylase [Chlamydomonas reinhardtii] |
RefSeq | XP_002464915.1 | 0 | 89 | 371 | 91 | 367 | hypothetical protein SORBIDRAFT_01g028700 [Sorghum bicolor] |
RefSeq | XP_002464915.1 | 4e-25 | 1043 | 1151 | 362 | 470 | hypothetical protein SORBIDRAFT_01g028700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 87 | 371 | 3 | 279 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1b1y_A | 3e-25 | 1053 | 1167 | 284 | 393 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 0 | 87 | 371 | 7 | 283 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgi_A | 9e-25 | 1053 | 1167 | 288 | 397 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 2xgb_A | 0 | 87 | 371 | 7 | 283 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
AV640833 | 166 | 159 | 324 | 0 |
HO781538 | 299 | 80 | 371 | 0 |
BU103692 | 285 | 89 | 371 | 0 |
BU103692 | 113 | 1055 | 1167 | 3e-16 |
HO781538 | 68 | 1053 | 1120 | 0.000000000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|
![]() |