| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre13.g579600.t1.3 |
| Family | GT5 |
| Protein Properties | Length: 409 Molecular Weight: 45004.1 Isoelectric Point: 6.286 |
| Chromosome | Chromosome/Scaffold: 13 Start: 2404202 End: 2410483 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 1 | 121 | 6.2e-24 |
| MLPKYDCINYDLVEDLVQEGSFTWGGTAVRVWRGGVEGLDTVFLEPENGMFWVGCIYGKNNDAQRFAFFCGAALQYLKNQAAPGGRGAADIIHCHDWQSA PVAYGDRGGAKTVFTIHNLSY | |||
| GT5 | 129 | 404 | 0 |
| AMQACQVATTVSPTYAREIAGHPSVAAHLNKLYGVLNGIDQDIWDPSEDPCLPLHFSADNVAAGKEAARRALRQKLGLVAADVPIVGCVTRLVAQKGIHL IKHAAWRTLERGGQFVLLGSAPDGRVQGEFNALREQLSRAYPDRAALVFTYDEPLSHLIYAGSDMFLVPSMFEPCGLTQMIAMRYGTIPVVRKTGGLVDT VYDVDHDEDRARLKGMDTNGFSFEGTDFAGMDYALNRALSVWYSDKALWHSLRKRAMTQDWSWNSPALDYVELYYK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 409 Download |
| MLPKYDCINY DLVEDLVQEG SFTWGGTAVR VWRGGVEGLD TVFLEPENGM FWVGCIYGKN 60 NDAQRFAFFC GAALQYLKNQ AAPGGRGAAD IIHCHDWQSA PVAYGDRGGA KTVFTIHNLS 120 YGADLIGRAM QACQVATTVS PTYAREIAGH PSVAAHLNKL YGVLNGIDQD IWDPSEDPCL 180 PLHFSADNVA AGKEAARRAL RQKLGLVAAD VPIVGCVTRL VAQKGIHLIK HAAWRTLERG 240 GQFVLLGSAP DGRVQGEFNA LREQLSRAYP DRAALVFTYD EPLSHLIYAG SDMFLVPSMF 300 EPCGLTQMIA MRYGTIPVVR KTGGLVDTVY DVDHDEDRAR LKGMDTNGFS FEGTDFAGMD 360 YALNRALSVW YSDKALWHSL RKRAMTQDWS WNSPALDYVE LYYKALKS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 2.0e-130 | 1 | 405 | 460 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 2.0e-135 | 1 | 405 | 452 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 4.0e-146 | 1 | 408 | 450 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-152 | 1 | 404 | 457 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 1 | 407 | 415 | + synthase/transferase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF49176.1 | 0 | 1 | 407 | 754 | 1163 | starch synthase III [Phaseolus vulgaris] |
| EMBL | CAB40374.1 | 0 | 1 | 407 | 736 | 1145 | Starch synthase isoform SS III [Vigna unguiculata] |
| EMBL | CAX51361.1 | 0 | 1 | 408 | 112 | 521 | soluble starch synthase [Hordeum vulgare subsp. vulgare] |
| RefSeq | XP_001693561.1 | 0 | 13 | 408 | 235 | 630 | soluble starch synthase, starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_002518476.1 | 0 | 1 | 407 | 649 | 1058 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 90 | 404 | 131 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 90 | 404 | 131 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 90 | 404 | 131 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 90 | 404 | 131 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 90 | 404 | 131 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO651392 | 415 | 1 | 407 | 0 |
| HO794758 | 416 | 1 | 407 | 0 |
| HO417650 | 415 | 1 | 407 | 0 |
| GT033751 | 348 | 13 | 352 | 0 |
| GW596286 | 327 | 22 | 340 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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