Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.006230.2 |
Family | CBM43 |
Protein Properties | Length: 482 Molecular Weight: 51641.7 Isoelectric Point: 4.9715 |
Chromosome | Chromosome/Scaffold: 00067 Start: 117210 End: 120019 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 346 | 428 | 3.8e-30 |
CAAKEGVDPRMLQAALDWACGPGRVDCSALLQGQPCYEPDNVMAHATYAFNTYYLQMGKGSGSCDFNGVAAVTTTNPSHGSCS | |||
GH17 | 8 | 327 | 0 |
VGVNIGTELSVMPHPTQVAALLKAQQIRHVRLYDADGGMLMALANTGIQVMVTIPNEQILGIGQSNSTAANWVNRNVLAHYPATNITAISVGSDVLTTLP NAAKILVNALKYIHSALVASNLDHQIKVSTPLSSSIILDSFPPSQAFFNASLDPVIVPLLGFLQSTNSFLMLNVYPYYDYMQSDGFILLDYALLKPLPSN KEAVDSNTLLRYTNVFDAMIDAAYFAMASLNFTNIPIVVSETGWPSKGGSNEPDATLENANTYNSNLIRHVLNKTGTPKHPGIAISTYIYELYNEDLKPG PISEKNWGLFDANGKPVYIL |
Full Sequence |
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Protein Sequence Length: 482 Download |
MFFADVFVGV NIGTELSVMP HPTQVAALLK AQQIRHVRLY DADGGMLMAL ANTGIQVMVT 60 IPNEQILGIG QSNSTAANWV NRNVLAHYPA TNITAISVGS DVLTTLPNAA KILVNALKYI 120 HSALVASNLD HQIKVSTPLS SSIILDSFPP SQAFFNASLD PVIVPLLGFL QSTNSFLMLN 180 VYPYYDYMQS DGFILLDYAL LKPLPSNKEA VDSNTLLRYT NVFDAMIDAA YFAMASLNFT 240 NIPIVVSETG WPSKGGSNEP DATLENANTY NSNLIRHVLN KTGTPKHPGI AISTYIYELY 300 NEDLKPGPIS EKNWGLFDAN GKPVYILRLT GSGLVLANDT TNQTYCAAKE GVDPRMLQAA 360 LDWACGPGRV DCSALLQGQP CYEPDNVMAH ATYAFNTYYL QMGKGSGSCD FNGVAAVTTT 420 NPSHGSCSFS GSVGRNGTMA NITAPSMNST NTDSSATAFE YNILSCAVMM VGALLGSSIW 480 L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-6 | 240 | 320 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 344 | 415 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-38 | 344 | 429 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-91 | 8 | 325 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK85402.2 | 0 | 5 | 456 | 19 | 470 | beta-1,3-glucanase [Camellia sinensis] |
EMBL | CBI33479.1 | 0 | 5 | 481 | 19 | 494 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002301689.1 | 0 | 5 | 481 | 6 | 481 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002305879.1 | 0 | 1 | 479 | 10 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531922.1 | 0 | 7 | 481 | 33 | 504 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 8 | 325 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 8 | 329 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 8 | 329 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 8 | 329 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 8 | 329 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE476981 | 314 | 79 | 392 | 0 |
EX302541 | 309 | 4 | 312 | 0 |
DR951683 | 294 | 51 | 344 | 0 |
GO371467 | 293 | 137 | 429 | 0 |
HS258579 | 257 | 65 | 321 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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