| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G006130_T03 |
| Family | GH51 |
| Protein Properties | Length: 657 Molecular Weight: 72200.2 Isoelectric Point: 4.8982 |
| Chromosome | Chromosome/Scaffold: 3 Start: 230006795 End: 230017669 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 175 | 646 | 0 |
| LQNLASATITVSGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRFLRFPGGCFVEGDWLRNAFRWRE SIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLAEDLGAAPIWVFNNGISHNDEVDTVAIAPFVKDVLDSLEFARGSADSTWGSVRAAMGHPEPFLVKHVA IGNEDCGKKFYRGNYLKFYNAIREAYPDIQMISNCDGSSRPLDHPADLYDFHVYTDSKTLFNMRSTFDRTSRSGPKAFVSEYAVWRSDAGRGSLLASLAE AAFLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNISSRYSSSLAASAITWQDAENSFLRVKVVNFGS DTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 657 Download |
| MDLKQAFSGT IFCLLLLFCV GCRCRTLEIE ATQTAALKVD ASPQLARKIP ETLFGIFFEE 60 INHAGAGGIW AELVSNRGFE AGGSHTPSNI DPWSIIGDDS SVFVATDRTS CFSRNIVALR 120 MEVLCDDCPA GGVGVYNPGF WGMNIEDGKA YNLVMYVQSP ETKDLTVSLT SSDGLQNLAS 180 ATITVSGTSN WTKVEQKLVA KGTNRTSRLQ ITTNKKGVVW LDQVSLMPED TYKGHGFRTE 240 LISMLLDLKP RFLRFPGGCF VEGDWLRNAF RWRESIGPWE ERPGHFGDVW HYWTDDGLGY 300 YEFLQLAEDL GAAPIWVFNN GISHNDEVDT VAIAPFVKDV LDSLEFARGS ADSTWGSVRA 360 AMGHPEPFLV KHVAIGNEDC GKKFYRGNYL KFYNAIREAY PDIQMISNCD GSSRPLDHPA 420 DLYDFHVYTD SKTLFNMRST FDRTSRSGPK AFVSEYAVWR SDAGRGSLLA SLAEAAFLTG 480 LEKNSDIVQM ASYAPLFVND NDQTWNPDAI VFNSWQHYGT PSYWMQTIFR ESSGAMIHPV 540 NISSRYSSSL AASAITWQDA ENSFLRVKVV NFGSDTVNLT VSTSGLGASV NALGSTATVL 600 TSGNVMDENS FSNPNKVAPV KSQLSNAAEQ MQVTLAPHSF TAFDLALAEP KLVAEI* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 4.0e-32 | 454 | 639 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 3.0e-32 | 236 | 639 | 480 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 2.0e-46 | 454 | 639 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27961.1 | 0 | 1 | 656 | 1 | 656 | unknown [Zea mays] |
| GenBank | ACN33779.1 | 0 | 14 | 656 | 38 | 680 | unknown [Zea mays] |
| GenBank | EEC67598.1 | 0 | 1 | 656 | 1 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| RefSeq | NP_001148977.1 | 0 | 14 | 656 | 38 | 680 | alpha-N-arabinofuranosidase A [Zea mays] |
| RefSeq | XP_002442705.1 | 0 | 1 | 656 | 1 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 9e-23 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 9e-23 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 9e-23 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 9e-23 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 9e-23 | 236 | 647 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
