| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G006130_T05 |
| Family | GH51 |
| Protein Properties | Length: 414 Molecular Weight: 45818.2 Isoelectric Point: 4.8244 |
| Chromosome | Chromosome/Scaffold: 3 Start: 230006909 End: 230016874 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 2 | 403 | 0 |
| LLDLKPRFLRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLAEDLGAAPIWVFNNGISHNDEVDTVAIAPFVKDVLDSL EFARGSADSTWGSVRAAMGHPEPFLVKHVAIGNEDCGKKFYRGNYLKFYNAIREAYPDIQMISNCDGSSRPLDHPADLYDFHVYTDSKTLFNMRSTFDRT SRSGPKAFVSEYAVWRSDAGRGSLLASLAEAAFLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNISS RYSSSLAASAITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFD LA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 414 Download |
| MLLDLKPRFL RFPGGCFVEG DWLRNAFRWR ESIGPWEERP GHFGDVWHYW TDDGLGYYEF 60 LQLAEDLGAA PIWVFNNGIS HNDEVDTVAI APFVKDVLDS LEFARGSADS TWGSVRAAMG 120 HPEPFLVKHV AIGNEDCGKK FYRGNYLKFY NAIREAYPDI QMISNCDGSS RPLDHPADLY 180 DFHVYTDSKT LFNMRSTFDR TSRSGPKAFV SEYAVWRSDA GRGSLLASLA EAAFLTGLEK 240 NSDIVQMASY APLFVNDNDQ TWNPDAIVFN SWQHYGTPSY WMQTIFRESS GAMIHPVNIS 300 SRYSSSLAAS AITWQDAENS FLRVKVVNFG SDTVNLTVST SGLGASVNAL GSTATVLTSG 360 NVMDENSFSN PNKVAPVKSQ LSNAAEQMQV TLAPHSFTAF DLALAEPKLV AEI* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 7.0e-29 | 1 | 396 | 472 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-32 | 211 | 396 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-46 | 211 | 396 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF86832.2 | 0 | 1 | 413 | 18 | 430 | unknown [Zea mays] |
| GenBank | ACN27961.1 | 0 | 1 | 413 | 244 | 656 | unknown [Zea mays] |
| RefSeq | NP_001065660.1 | 0 | 1 | 413 | 246 | 658 | Os11g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001066062.1 | 0 | 1 | 413 | 248 | 660 | Os12g0128700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002442705.1 | 0 | 1 | 413 | 244 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 3e-21 | 10 | 404 | 65 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 3e-21 | 10 | 404 | 65 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 3e-21 | 10 | 404 | 65 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 3e-21 | 10 | 404 | 65 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 3e-21 | 10 | 404 | 65 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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