| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G077299_T03 |
| Family | GH51 |
| Protein Properties | Length: 660 Molecular Weight: 72399.4 Isoelectric Point: 4.7462 |
| Chromosome | Chromosome/Scaffold: 4 Start: 186274255 End: 186279757 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 178 | 650 | 0 |
| LQNLASATVTVSGESNWIKVEQKLVAKGTNRTSRLQITTNKKGVVWFDQVSLMPEDTYKGHGFRTELISMILDLKPRFLRFPGGCFVEGGWLRNAFRWRE SIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLAEDLGTEPIWVFNNGVSHNDEVDTVAIAPFVKDVLDSIEFARGSANSTWGSVRAAMGHPEPFPVKYVA IGNEDCGKKFYRGNYLKFYNAIRQAYPDIQMISNCDGSSTPLDHPADLYDFHVYNDSKTLFNMKSTFDRTSRSGPKAFVSEYAVWRGDAGRGSLLASLAE AAFLTGLEKNSDIVSMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTISSSYSGSLAASAITWQDSENSFLRVKVINFGS DAVTLTISTSGLQASINALGSTATVLTSADVMDENSFSNPTKVVPVKSDLSNAAEQMQVTLAPRSFSSFDLAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 660 Download |
| MGITSNDAAP RAVLLRFLFL LCIGCKCLAS EVEATQTATL AVDASPQLAR KIPDTLFGIF 60 FEEINHAGAG GIWAELVSNR GFEAGGLHTP SNIDPWSIIG DDSSVFVETD RTSCFSRNIV 120 ALRMEVLCDN CPTGGVGVYN PGFWGMNIEE GKVYNLVMFV KSPETTDLTV SLTSSNGLQN 180 LASATVTVSG ESNWIKVEQK LVAKGTNRTS RLQITTNKKG VVWFDQVSLM PEDTYKGHGF 240 RTELISMILD LKPRFLRFPG GCFVEGGWLR NAFRWRESIG PWEERPGHFG DVWHYWTDDG 300 LGYYEFLQLA EDLGTEPIWV FNNGVSHNDE VDTVAIAPFV KDVLDSIEFA RGSANSTWGS 360 VRAAMGHPEP FPVKYVAIGN EDCGKKFYRG NYLKFYNAIR QAYPDIQMIS NCDGSSTPLD 420 HPADLYDFHV YNDSKTLFNM KSTFDRTSRS GPKAFVSEYA VWRGDAGRGS LLASLAEAAF 480 LTGLEKNSDI VSMASYAPLF VNDNDQTWNP DAIVFNSWQH YGTPSYWMQT LFRESSGAMF 540 HPTTISSSYS GSLAASAITW QDSENSFLRV KVINFGSDAV TLTISTSGLQ ASINALGSTA 600 TVLTSADVMD ENSFSNPTKV VPVKSDLSNA AEQMQVTLAP RSFSSFDLAL AQSKLVAEM* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-31 | 457 | 642 | 203 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 5.0e-35 | 239 | 644 | 482 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 4.0e-46 | 457 | 642 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27961.1 | 0 | 17 | 659 | 14 | 656 | unknown [Zea mays] |
| GenBank | ACN33779.1 | 0 | 1 | 659 | 22 | 680 | unknown [Zea mays] |
| GenBank | EEC67598.1 | 0 | 24 | 659 | 21 | 658 | hypothetical protein OsI_34967 [Oryza sativa Indica Group] |
| RefSeq | NP_001148977.1 | 0 | 1 | 659 | 22 | 680 | alpha-N-arabinofuranosidase A [Zea mays] |
| RefSeq | XP_002442705.1 | 0 | 18 | 659 | 15 | 656 | hypothetical protein SORBIDRAFT_08g001540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 8e-23 | 239 | 650 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 8e-23 | 239 | 650 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 8e-23 | 239 | 650 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 8e-23 | 239 | 650 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 8e-23 | 239 | 650 | 48 | 483 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
