| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G083222_T01 |
| Family | CBM43 |
| Protein Properties | Length: 485 Molecular Weight: 52182.6 Isoelectric Point: 7.1433 |
| Chromosome | Chromosome/Scaffold: 9 Start: 137155583 End: 137158520 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 372 | 451 | 2.7e-24 |
| WCVVDNNKDLSNVSSSFSSACANGDCTSLLPGGSCSGLAWPGNVSYAFNNYYQQHDQSEDSCYFNGLGLITTVDPSVDNC | |||
| GH17 | 32 | 350 | 0 |
| VGVNWGFASSHSLPAAQVVRGLLLPNSVPRVRLAAASSDALTALEGTGIAVSVGIPDALLRPLASSTKAAAAWVHDNITRYSSSVRFEYIVVGDEPFLLR HGQNFHPFVVRAAENVQQALVHAKLSGKMKVVVPCSADTFQNASTLPTKASFRPDVNKTMADLLSFLANSSSPFMVELDPFLSFQHNRNLSLDYFLFQLM SHPVKDGENKYDNYVDASIDALVTSLTKAGFSDMDIIVGRAGWPTDGAMNATPAIAQSFMTGLVNHLAKKSGTPLRPKVPPVEMYLFSLLDEDQRSIASG GYERHHGIFTFDGQAKYYA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MLSRRRSSPR PLVPGLLLLL LAMAPPPPAS AVGVNWGFAS SHSLPAAQVV RGLLLPNSVP 60 RVRLAAASSD ALTALEGTGI AVSVGIPDAL LRPLASSTKA AAAWVHDNIT RYSSSVRFEY 120 IVVGDEPFLL RHGQNFHPFV VRAAENVQQA LVHAKLSGKM KVVVPCSADT FQNASTLPTK 180 ASFRPDVNKT MADLLSFLAN SSSPFMVELD PFLSFQHNRN LSLDYFLFQL MSHPVKDGEN 240 KYDNYVDASI DALVTSLTKA GFSDMDIIVG RAGWPTDGAM NATPAIAQSF MTGLVNHLAK 300 KSGTPLRPKV PPVEMYLFSL LDEDQRSIAS GGYERHHGIF TFDGQAKYYA NIGQGPKSLK 360 NAPDVNYLPS KWCVVDNNKD LSNVSSSFSS ACANGDCTSL LPGGSCSGLA WPGNVSYAFN 420 NYYQQHDQSE DSCYFNGLGL ITTVDPSVDN CLFPLTIHVS AATSLHLTLP VSLLLVLWFC 480 IVCI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0007 | 266 | 343 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 4.0e-13 | 371 | 439 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-27 | 371 | 453 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-56 | 44 | 348 | 306 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 32 | 480 | 35 | 483 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACF78459.1 | 0 | 1 | 484 | 1 | 484 | unknown [Zea mays] |
| GenBank | EEC75046.1 | 0 | 32 | 480 | 35 | 483 | hypothetical protein OsI_11151 [Oryza sativa Indica Group] |
| RefSeq | NP_001130286.1 | 0 | 1 | 484 | 1 | 484 | hypothetical protein LOC100191380 [Zea mays] |
| RefSeq | XP_002468022.1 | 0 | 32 | 466 | 32 | 466 | hypothetical protein SORBIDRAFT_01g038220 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 1.4013e-45 | 32 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 1.4013e-45 | 32 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_B | 1.4013e-45 | 32 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_A | 1.4013e-45 | 32 | 352 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3em5_D | 1.4013e-45 | 32 | 352 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
