| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G097277_T01 |
| Family | GH51 |
| Protein Properties | Length: 664 Molecular Weight: 72242.4 Isoelectric Point: 6.7503 |
| Chromosome | Chromosome/Scaffold: 2 Start: 217649726 End: 217656273 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 222 | 535 | 0 |
| SGVVWLDQVSVMPMDTYMGHGFRKDLASMLANLEPQFLKFPGGNYAMGNYLRNAFRWSETVGPWEERPGHFNDAWGYWTDDGLGFFEFLQLAEDLGASPV WVVNDGASLNEEVSTKTIASLVKDVVNGIEFASGGPKTTWGSVRAAMGHPEPFKLDYVSIGNQECWMLYYRGNYQKFYSAIKSAYPDINIISSCDRPTIS PSNPADLYDVHVYTSSTNMFSKASMFDNTPRGAPKAIVSEYAVTGNDAGKGTLVAALAEAAFLIGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFNSG QHYGCPNYWMLHFF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 664 Download |
| MGVQRASGVS LLHALLVVFW ALSSRRAKGQ NPSGHLSVDA SPQNVRKIPD KMFGIFFEEI 60 NHAGAGGLWS ELVSNRGFEA GGPNTPSNID PWLIIGDESS IIVGTDRTSC FERNPVALRM 120 EVLCGSKKTN ACPSGGVGVY NPGYWGMNIE KGKVYKVSLH VRSSDALSLT ASLTSSDGLQ 180 KLAAHTITGS KKTFAKWTKV EFHLRSNQNN SNSRFQLTTS KSGVVWLDQV SVMPMDTYMG 240 HGFRKDLASM LANLEPQFLK FPGGNYAMGN YLRNAFRWSE TVGPWEERPG HFNDAWGYWT 300 DDGLGFFEFL QLAEDLGASP VWVVNDGASL NEEVSTKTIA SLVKDVVNGI EFASGGPKTT 360 WGSVRAAMGH PEPFKLDYVS IGNQECWMLY YRGNYQKFYS AIKSAYPDIN IISSCDRPTI 420 SPSNPADLYD VHVYTSSTNM FSKASMFDNT PRGAPKAIVS EYAVTGNDAG KGTLVAALAE 480 AAFLIGLERN SDVVEMASCA PLFVNDNDRR WSPDAIVFNS GQHYGCPNYW MLHFFKESSG 540 ATLHPTAIQV SSYDQLVASA ITWQNAKDKS TYLRIKVVNF GNQAVDLNIS VVELATGVKK 600 SGSKQTVLTS SSPLDENSFQ QPEKVAPVSS PMANAGQQMG ASVGPYSLTS FDLLLEPSKH 660 DSV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 3.0e-6 | 473 | 647 | 183 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 1.0e-26 | 242 | 384 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 7.0e-40 | 460 | 647 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-52 | 460 | 647 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95656.1 | 0 | 1 | 656 | 1 | 658 | Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACR35485.1 | 0 | 1 | 663 | 1 | 663 | unknown [Zea mays] |
| DDBJ | BAC10349.1 | 0 | 1 | 663 | 1 | 664 | putative arabinoxylan narabinofuranohydrolase isoenzyme AXAH-I [Oryza sativa Japonica Group] |
| GenBank | EEE58961.1 | 0 | 1 | 656 | 1 | 662 | hypothetical protein OsJ_10647 [Oryza sativa Japonica Group] |
| RefSeq | XP_002463418.1 | 0 | 1 | 663 | 1 | 666 | hypothetical protein SORBIDRAFT_02g043530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 2e-16 | 242 | 656 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 2e-16 | 242 | 656 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 2e-16 | 242 | 656 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 2e-16 | 242 | 656 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 2e-16 | 242 | 656 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
