| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01011682001 |
| Family | CBM43 |
| Protein Properties | Length: 499 Molecular Weight: 53517.8 Isoelectric Point: 5.0998 |
| Chromosome | Chromosome/Scaffold: 1 Start: 5138986 End: 5144028 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 361 | 443 | 4.5e-30 |
| CVARDGADPKMLQAALDWACGPGKVDCSPLLQGQPCSEPDNVVAHATYAFDAYYHQMAMGQGTCYFNGVATITTTDPSHGSCK | |||
| GH17 | 23 | 342 | 0 |
| IGVNIGTDLSNMPNPTQVVALLKSQQIRHVRLYDADRAMLLALANTGIRVTVSVPNDQLLGIGQSNATAANWVARNVLAHIPATNITAIAVGSEVLTTLP NAAPVLVSALKFIHSALVAANLDSQIKVSTPHSSSILLDSFPPSQAFFNRSWEPVMVPLLKFLQSTSSYLMLNVYPYYDYMQSNSVIPLDYALFRPLPPN KEAVDANTLLHYTNVFDAVVDAAFFAMSYLNFTNIPLVVLESGWPSKGGSSEPDATIDNANTYNSNLIRHVLNNTGTPKHPGIAVSTYIYELYNEDLRPG SVSEKNWGLFDANGMPVYIL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 499 Download |
| MVPFLFLLLL VVSGTVADED AFIGVNIGTD LSNMPNPTQV VALLKSQQIR HVRLYDADRA 60 MLLALANTGI RVTVSVPNDQ LLGIGQSNAT AANWVARNVL AHIPATNITA IAVGSEVLTT 120 LPNAAPVLVS ALKFIHSALV AANLDSQIKV STPHSSSILL DSFPPSQAFF NRSWEPVMVP 180 LLKFLQSTSS YLMLNVYPYY DYMQSNSVIP LDYALFRPLP PNKEAVDANT LLHYTNVFDA 240 VVDAAFFAMS YLNFTNIPLV VLESGWPSKG GSSEPDATID NANTYNSNLI RHVLNNTGTP 300 KHPGIAVSTY IYELYNEDLR PGSVSEKNWG LFDANGMPVY ILHLTGSGTV LANDTTNQTY 360 CVARDGADPK MLQAALDWAC GPGKVDCSPL LQGQPCSEPD NVVAHATYAF DAYYHQMAMG 420 QGTCYFNGVA TITTTDPSHG SCKFPGSAGR NNTFINGTSL APSSNSTSSG SQSQYFYSSG 480 ALMSCMIIGI LVWSAVLL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 9.0e-6 | 255 | 335 | 86 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 8.0e-19 | 359 | 431 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-39 | 359 | 444 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-84 | 23 | 340 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82488.1 | 0 | 34 | 441 | 1 | 408 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI26850.1 | 0 | 1 | 478 | 1 | 478 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002312452.1 | 0 | 20 | 498 | 1 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314794.1 | 0 | 20 | 498 | 15 | 493 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527772.1 | 0 | 5 | 484 | 4 | 484 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 23 | 340 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 23 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 23 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 23 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 23 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
