| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma15g11500.1 |
| Family | CBM53 |
| Protein Properties | Length: 1167 Molecular Weight: 132046 Isoelectric Point: 5.433 |
| Chromosome | Chromosome/Scaffold: 15 Start: 8448378 End: 8459334 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM53 | 282 | 365 | 6.2e-31 |
| QDIELFLNKNLSTLSEEPDILIMGAFNDWKWKSFSIRLNKSDLKGDWWSCQLYVPKEAYKVDFVFFNEQNVYDNNDQKDFCIPV | |||
| CBM53 | 459 | 546 | 2.7e-33 |
| IRLYYNRSSGPLANANEIWIHGGHNNWKYGLSIVERLVKSVLKGGEWWYADVVVPDQALVLDWVFADGPPKKAVVYDNNRKQDFHAIV | |||
| CBM53 | 618 | 706 | 5e-34 |
| GSTVTVFYNPSNTNLNGKPEVWFRCSFNRWSHRNGPLPPQRMLPAENGTHVKASVKVPLDAYMMDFVFSESEHGGVFDNKFGMDYHIPV | |||
| GT5 | 717 | 1160 | 0 |
| HIIHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSNVKDFDYHKSYSWGGTEIKVWHGKVEGLSVYFLEPQNGFFQVGCVYGRGND GERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPAAWLFKDNYAHYGLSKARVVFTIHNLEFGAHSIGKAMAHADKATTVSPTYSREIAGNPLIAPHLHK FHGIINGIDPDIWDPYNDKFIPESYSSKNVVEGKRASKEALQQRLSLKKADLPLVGIITRLTHQKGIHLIKHAIWRTLERGGQVVLLGSAPDPRIQNDFV NLANELHSAHHDRARLCLAYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSVPVVRKTGGLYDTVFDVDHDKDRAQAQGLEPNGFSFDGADTGGV DYALNRAISAWYEGRDWFNSLCKRVMEQDWSWNRPALDYLELYH | |||
| Full Sequence |
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| Protein Sequence Length: 1167 Download |
| MEMSLQLNCK TVFPYRGGDC VSGVLPRRHS VTFTSGYICS PCKAGWGVSF FRASADFSRK 60 RQQKKVPVAR TKGTAGKGFV PSKKSTRVKK GDTLTSVVSE VSGGDKKQTV DVNVDADKEG 120 ELEFSQEEKF EAVDRIDEIV RDVGELSLLD ETAGELLLLD ESNEANISVI DEDDEVLELR 180 KEEIPYNGGV GIVEGSSEEG LFDRARIDEN VKETDTDGEI TEEAVEESSS AADDRINEEA 240 ARLLKLELEA NQRRQEIERI AEEKLSQGMK LFVYPPVVKP DQDIELFLNK NLSTLSEEPD 300 ILIMGAFNDW KWKSFSIRLN KSDLKGDWWS CQLYVPKEAY KVDFVFFNEQ NVYDNNDQKD 360 FCIPVDGGMD ALAFEDFLLE EKRKELEELA WAQAERERQA EEQRRMEADR AAKEEDRARA 420 KAEVGRMRET LPQLLKNAVK SIDNVWYIEP SEFKGNELIR LYYNRSSGPL ANANEIWIHG 480 GHNNWKYGLS IVERLVKSVL KGGEWWYADV VVPDQALVLD WVFADGPPKK AVVYDNNRKQ 540 DFHAIVPMAI PDEQYWVEEE QQIYRKFQEE RRLREEAIRA KAGKTAQMKA ETKERTLKRF 600 LLSQKHIVFT DPLDVQAGST VTVFYNPSNT NLNGKPEVWF RCSFNRWSHR NGPLPPQRML 660 PAENGTHVKA SVKVPLDAYM MDFVFSESEH GGVFDNKFGM DYHIPVFGGI VKEPPLHIIH 720 IAVEMAPIAK VGGLGDVVTS LSRAVQDLNH NVDIILPKYD CLNLSNVKDF DYHKSYSWGG 780 TEIKVWHGKV EGLSVYFLEP QNGFFQVGCV YGRGNDGERF GFFCHAALEF LLQSGFHPDI 840 IHCHDWSSAP AAWLFKDNYA HYGLSKARVV FTIHNLEFGA HSIGKAMAHA DKATTVSPTY 900 SREIAGNPLI APHLHKFHGI INGIDPDIWD PYNDKFIPES YSSKNVVEGK RASKEALQQR 960 LSLKKADLPL VGIITRLTHQ KGIHLIKHAI WRTLERGGQV VLLGSAPDPR IQNDFVNLAN 1020 ELHSAHHDRA RLCLAYDEPL SHLIYAGADF ILVPSIFEPC GLTQLTAMRY GSVPVVRKTG 1080 GLYDTVFDVD HDKDRAQAQG LEPNGFSFDG ADTGGVDYAL NRAISAWYEG RDWFNSLCKR 1140 VMEQDWSWNR PALDYLELYH AARKAE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 6.0e-146 | 716 | 1162 | 493 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 1.0e-158 | 716 | 1162 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 2.0e-169 | 716 | 1165 | 487 | + glycogen synthase; Provisional | ||
| PLN02316 | PLN02316 | 0 | 265 | 1164 | 900 | + synthase/transferase | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 717 | 1160 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF49176.1 | 0 | 1 | 1166 | 1 | 1165 | starch synthase III [Phaseolus vulgaris] |
| EMBL | CAB40374.1 | 0 | 1 | 1166 | 1 | 1147 | Starch synthase isoform SS III [Vigna unguiculata] |
| RefSeq | XP_002269011.1 | 0 | 63 | 1164 | 32 | 1140 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305571.1 | 0 | 225 | 1164 | 63 | 1017 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518476.1 | 0 | 66 | 1164 | 1 | 1058 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 716 | 1160 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 716 | 1160 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 716 | 1160 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 716 | 1160 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 716 | 1160 | 1 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778003 | 721 | 233 | 953 | 0 |
| HO794758 | 570 | 598 | 1167 | 0 |
| HO651392 | 412 | 753 | 1164 | 0 |
| HO794758 | 110 | 265 | 369 | 0.003 |
| HO794758 | 132 | 424 | 553 | 4 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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