| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G172000.2 |
| Family | CE11 |
| Protein Properties | Length: 317 Molecular Weight: 34813.9 Isoelectric Point: 6.9587 |
| Chromosome | Chromosome/Scaffold: 02 Start: 43608941 End: 43614585 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 25 | 308 | 0 |
| QQTLAGCIELSGKTLHSGKVSKVKIWPVFAGEGRYFEFHSNLIPASIDFVRESLLCTTLCKDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDTEVEV PIFDGSANAWVEAIEQVGRKEALDRCGNNVEKLAPHLSEPFYVSRNDSFMVAFPASKVHISCGIDFPKVPAIGCQWFSSAALDDSYEKHIACSRTFCIYE EVEHMCSMGLIKGGSLDNAIVCSATKGWLNPPLRFPDEPCRHKVLDLIGDLSLFARSGSQGFPMARVISFKGGHSLNADFVRRL | |||
| Full Sequence |
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| Protein Sequence Length: 317 Download |
| MRLSAAINSF KSSNLISWKT TGKLQQTLAG CIELSGKTLH SGKVSKVKIW PVFAGEGRYF 60 EFHSNLIPAS IDFVRESLLC TTLCKDGYKI RTVEHLLSAL EAKGIDNCRI QIQSLDSEDT 120 EVEVPIFDGS ANAWVEAIEQ VGRKEALDRC GNNVEKLAPH LSEPFYVSRN DSFMVAFPAS 180 KVHISCGIDF PKVPAIGCQW FSSAALDDSY EKHIACSRTF CIYEEVEHMC SMGLIKGGSL 240 DNAIVCSATK GWLNPPLRFP DEPCRHKVLD LIGDLSLFAR SGSQGFPMAR VISFKGGHSL 300 NADFVRRLSG ITVQET* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 2.0e-64 | 25 | 309 | 318 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 1.0e-70 | 25 | 308 | 290 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 5.0e-85 | 24 | 308 | 294 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 2.0e-88 | 25 | 308 | 290 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 9.0e-101 | 25 | 308 | 292 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN61403.1 | 0 | 1 | 312 | 1 | 367 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI26831.1 | 0 | 1 | 312 | 1 | 313 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173874.2 | 0 | 1 | 309 | 1 | 324 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173884.5 | 0 | 1 | 309 | 44 | 367 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 1 | 295 | 1 | 296 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xxe_A | 2e-37 | 24 | 309 | 3 | 264 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 2go4_B | 1e-36 | 24 | 309 | 3 | 264 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 2go4_A | 1e-36 | 24 | 309 | 3 | 264 | A Chain A, Rdc Refined Solution Structure Of The AalpxcTU-514 Complex |
| PDB | 2go3_B | 1e-36 | 24 | 309 | 3 | 264 | A Chain A, Crystal Structure Of Aquifex Aeolicus Lpxc Complexed With Imidazole. |
| PDB | 2go3_A | 1e-36 | 24 | 309 | 3 | 264 | A Chain A, Crystal Structure Of Aquifex Aeolicus Lpxc Complexed With Imidazole. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BQ405531 | 214 | 7 | 220 | 0 |
| BE053971 | 201 | 1 | 201 | 0 |
| CU585894 | 228 | 3 | 230 | 0 |
| CK277774 | 275 | 11 | 284 | 0 |
| CK277774 | 37 | 277 | 312 | 0.003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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