| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G080800.1 |
| Family | CBM49 |
| Protein Properties | Length: 625 Molecular Weight: 68878.9 Isoelectric Point: 9.1685 |
| Chromosome | Chromosome/Scaffold: 03 Start: 19800250 End: 19804282 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 533 | 609 | 4.3e-38 |
| FIQQKMTTSWNEKGRTYYRYSIVMTNKSSKTLNDLKLSISKLYGPIWGLTKSGNSYGFPTHLNSLPAGKSLEFVYIH | |||
| GH9 | 25 | 486 | 0 |
| DYNQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKPMAANGELGHAMEAVKWGTDYL IKAHPEPYVLYGEVGDGNTDHYCWQRPEDMTTDRHAYRIDPSNPGSDLAGETAAAMAAASIVFRRSNPAYSSELLHHAYQLFDFADKYKGKYDSSITVAQ KYYRSVSGYNDELLWAAAWLYQASNNQYYLNYLGKNGDSMGGTGWAMTEFGWDVKYAGVQTLVAKFLMQGKAGMHAPVFERYHQKAEHFMCSLIGKGTRN VQKTPGGLMFRQRWNNMQFVTSASFLATVYSDYLASSKGTLRCAAGNVAPTQLLSFAKSQVDYLLGDNPRGTSYMVGYGNNFPRQVHHRGSSIVSIKVDS KFIACRQGYAAWYTRKASDPNVLTGAVVGGPDAYDNFADERNNYEQTEPATYNNAPLLGILA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 625 Download |
| MEKSMSMAPL LLMVLCLPFA LGWHDYNQAL SKSILFFEAQ RSGYLPHNQR VTWRANSGLN 60 DGKASGVDLV GGYYDAGDNV KFGLPMAFTI TMMSWSIIEY GKPMAANGEL GHAMEAVKWG 120 TDYLIKAHPE PYVLYGEVGD GNTDHYCWQR PEDMTTDRHA YRIDPSNPGS DLAGETAAAM 180 AAASIVFRRS NPAYSSELLH HAYQLFDFAD KYKGKYDSSI TVAQKYYRSV SGYNDELLWA 240 AAWLYQASNN QYYLNYLGKN GDSMGGTGWA MTEFGWDVKY AGVQTLVAKF LMQGKAGMHA 300 PVFERYHQKA EHFMCSLIGK GTRNVQKTPG GLMFRQRWNN MQFVTSASFL ATVYSDYLAS 360 SKGTLRCAAG NVAPTQLLSF AKSQVDYLLG DNPRGTSYMV GYGNNFPRQV HHRGSSIVSI 420 KVDSKFIACR QGYAAWYTRK ASDPNVLTGA VVGGPDAYDN FADERNNYEQ TEPATYNNAP 480 LLGILARLGS GHSGYNQLLP EAVPVPKPVA AKPKAEPKAK STPNPATTSS PIFIQQKMTT 540 SWNEKGRTYY RYSIVMTNKS SKTLNDLKLS ISKLYGPIWG LTKSGNSYGF PTHLNSLPAG 600 KSLEFVYIHA ASPADVSVSS YNLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 1 | 624 | 629 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 10 | 622 | 616 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 25 | 488 | 466 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 10 | 488 | 479 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 25 | 486 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN04496.2 | 0 | 1 | 624 | 1 | 620 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
| EMBL | CAI68019.1 | 0 | 24 | 624 | 26 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| EMBL | CAI68020.1 | 0 | 24 | 624 | 26 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| RefSeq | XP_002299478.1 | 0 | 3 | 624 | 6 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303645.1 | 0 | 24 | 623 | 26 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 488 | 3 | 428 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1ksc_A | 0 | 24 | 488 | 3 | 428 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1ks8_A | 0 | 24 | 488 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 18 | 488 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 25 | 623 | 5 | 536 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
