| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G133700.1 |
| Family | CBM49 |
| Protein Properties | Length: 629 Molecular Weight: 69543.8 Isoelectric Point: 9.2808 |
| Chromosome | Chromosome/Scaffold: 04 Start: 36626402 End: 36631042 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 536 | 613 | 5.19999e-40 |
| ITIEQKMTTSWNAKGKTYYRYSTIVTNKSYKTLKDLKLSISKLYGPLWGLSKSGNSYGFPTWLNSLPAGKSIEFVYIH | |||
| GH9 | 29 | 490 | 0 |
| DYNQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKQMGANGELGHAMEAVKWGTDYL IKAHPEPYVLYGEVGDGNSDHYCWQRPEDMTTNRHAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPAYSTELLRHAHQLFEFADKYRGKYDSSITVAQ KYYRSISGYNDELLWAAAWLYQASNNEYYLNYLGKNGDSMGGTGWAMTEFGWDVKYAGVQTLVAKFLMQGKAGLHAPVFERYHQKAEYFMCSLIGKGGRN IQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSRGSLKCAAVNVAPSELLSFAKSQVDYILGDNPRATSYMVGYGNNFPRQVHHRASSIVSFKVDP KFVACRQGYATWYSRKASDPNVLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGILA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 629 Download |
| MYMEKLMRLI EMTPLLLLLF LPSAFAGHDY NQALSKSILF FEAQRSGYLP HNQRVTWRAN 60 SGLNDGKASG VDLVGGYYDA GDNVKFGLPM AFTITMMSWS IIEYGKQMGA NGELGHAMEA 120 VKWGTDYLIK AHPEPYVLYG EVGDGNSDHY CWQRPEDMTT NRHAYKIDPS NPGSDLAGET 180 AAAMAAASIV FRRSNPAYST ELLRHAHQLF EFADKYRGKY DSSITVAQKY YRSISGYNDE 240 LLWAAAWLYQ ASNNEYYLNY LGKNGDSMGG TGWAMTEFGW DVKYAGVQTL VAKFLMQGKA 300 GLHAPVFERY HQKAEYFMCS LIGKGGRNIQ KTPGGLIFRQ RWNNMQFVTS ASFLATVYSD 360 YLASSRGSLK CAAVNVAPSE LLSFAKSQVD YILGDNPRAT SYMVGYGNNF PRQVHHRASS 420 IVSFKVDPKF VACRQGYATW YSRKASDPNV LTGAIVGGPD AYDNFADERD NYEQTEPATY 480 NNAPLLGILA RLGGAHGGYN QLLPVVVPAP NPVVAKPKPA PKPKFTPTPA TSSNPITIEQ 540 KMTTSWNAKG KTYYRYSTIV TNKSYKTLKD LKLSISKLYG PLWGLSKSGN SYGFPTWLNS 600 LPAGKSIEFV YIHSTSPADV SVSSYNLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 3 | 628 | 629 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 24 | 626 | 606 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 26 | 492 | 469 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 29 | 492 | 464 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 29 | 490 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN04496.2 | 0 | 3 | 628 | 1 | 620 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
| EMBL | CAI68020.1 | 0 | 3 | 628 | 1 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| RefSeq | XP_002270880.1 | 0 | 3 | 628 | 1 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299478.1 | 0 | 3 | 628 | 1 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303645.1 | 0 | 3 | 627 | 1 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 28 | 492 | 3 | 428 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1ksc_A | 0 | 28 | 492 | 3 | 428 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1ks8_A | 0 | 28 | 492 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 22 | 492 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 29 | 564 | 5 | 487 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
