| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.005G210200.1 |
| Family | CBM49 |
| Protein Properties | Length: 622 Molecular Weight: 69054.9 Isoelectric Point: 6.5998 |
| Chromosome | Chromosome/Scaffold: 05 Start: 59135452 End: 59138318 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM49 | 530 | 608 | 1.4e-29 |
| RFLHSITNTWNVGKTTYYRHKVVIKNTSEKPITDLKLVIEDLSGNLWGLSPTPVKNTYELPPWLKVLNPGSDCSFVYIQ | |||
| GH9 | 25 | 485 | 0 |
| NYGEALDKTFMFLEAQRSGKLPFDQRVKWRGDSGLKDGALQGVDLVGGYYDAGDHVKFGLPMAFSVTMLAWGTIEYRKEITNLNQMGHTLWAIRWGTDYF IKAHTQPNVLWGQVGDGDSDHYCWERAEDMTTPRTAYKLDEAHPGSDLAGETAAALAAAAIAFKPYNSSYSELLLVHAKQLFSFADKFRGLYDDSIQCAK QFYTSSGYSDELLWAATWLFRATGDEHYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKVLMEQKGGTYTSTLKQYQAKADYFACACLQKNDGYN VHLTPGGLMYVHEWNNLQYASAASFLLAVYSDYLSAANAKLTCPDGQIQPHEVLNFAKSQADYILGKNPKSMSYLVGYGPKYPTHVHHRGASIASISVLP SMVSCVQGFEAWYRRPETDPNVIYGALVGGPDQNDGFNDDRSSYEQTEPTLSGSAPLVGLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MNNFNIVACL ILLGFQAAIV LAEFNYGEAL DKTFMFLEAQ RSGKLPFDQR VKWRGDSGLK 60 DGALQGVDLV GGYYDAGDHV KFGLPMAFSV TMLAWGTIEY RKEITNLNQM GHTLWAIRWG 120 TDYFIKAHTQ PNVLWGQVGD GDSDHYCWER AEDMTTPRTA YKLDEAHPGS DLAGETAAAL 180 AAAAIAFKPY NSSYSELLLV HAKQLFSFAD KFRGLYDDSI QCAKQFYTSS GYSDELLWAA 240 TWLFRATGDE HYLKYVVDNA VYMGGTGWAV KEFSWDNKYA GVQILLSKVL MEQKGGTYTS 300 TLKQYQAKAD YFACACLQKN DGYNVHLTPG GLMYVHEWNN LQYASAASFL LAVYSDYLSA 360 ANAKLTCPDG QIQPHEVLNF AKSQADYILG KNPKSMSYLV GYGPKYPTHV HHRGASIASI 420 SVLPSMVSCV QGFEAWYRRP ETDPNVIYGA LVGGPDQNDG FNDDRSSYEQ TEPTLSGSAP 480 LVGLFSKLES LSGNKGPYHK RPTTEQPSQN YHHQETSVPS TKSPGVPPVR FLHSITNTWN 540 VGKTTYYRHK VVIKNTSEKP ITDLKLVIED LSGNLWGLSP TPVKNTYELP PWLKVLNPGS 600 DCSFVYIQEG PQAKVSVLSY Q* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 3 | 621 | 622 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 1 | 620 | 632 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 12 | 502 | 493 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 9 | 488 | 480 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 25 | 486 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 9 | 621 | 8 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 24 | 620 | 29 | 626 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 30 | 621 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 18 | 620 | 20 | 610 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 12 | 621 | 15 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 24 | 491 | 3 | 431 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ksc_A | 0 | 24 | 491 | 3 | 431 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ks8_A | 0 | 24 | 491 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 24 | 560 | 4 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 24 | 560 | 4 | 490 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
