| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G011500.1 |
| Family | GT35 |
| Protein Properties | Length: 992 Molecular Weight: 112130 Isoelectric Point: 6.8397 |
| Chromosome | Chromosome/Scaffold: 06 Start: 2483587 End: 2492927 |
| Description | Glycosyl transferase, family 35 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT35 | 180 | 504 | 0 |
| ALSKLGHNLENIASQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYRYGLFKQRITKDGQEEVAENWLEMSNPWEIVRNDVAYPIKFYGKVLTDS DGKKHWIGGEDIQAVAYDVPIPGYETKTTINLRLWSTKAPSGDFDLSVFNSGKHTQAAEALYNAEKICYVLYPGDESLEGKILRLKQQYTLCSASLQDII ARFERRSGAKVKWDEFPDKVAVQMNDTHPTLCIPELMRILIDVKGLSWNEAWNITQRTVAYTNHTVLPEALEKWSLELMEKLLPRHMEIIEMVDEELIRT IVSEHGKADSNLLEKKLKQMRILEN | |||
| GT35 | 583 | 986 | 0 |
| PKLVRMANLCVVGGHAVNGVAAIHSEIVKDEVFNDFFQLKFWQLWPEKFQNKTNGVTPRRWIRFCNPELSKIITRWTGSEDWVLNTEKLSELRKFADNED LQIQWRAAKRSNKLKVASLIKERTGYIVSPDSMFDIQVKRIHEYKRQLLNILGIVYRYKKMKEMSASERKKKFVPRVCIFGGKAFATYVQAKRIVKFITD VGATVNHDPDIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEENFFLFGAKAHEIAGLRKER AEGKFVPDPRFEEVKKFIKSGVFGSSNYNELLGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDETYKDQKVWTRMSIMNTGGSYNFSSDRTIHEYAREI WNIK | |||
| Full Sequence |
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| Protein Sequence Length: 992 Download |
| MATWRYSTMP GGAEAVSSRN AVGRFVDFSH GGGGGRRVIK SDQLMLIRKW QLRPVKRSFS 60 VRNVSSEQQQ KVKDLVTQQQ ESPGSYNPFP PDASSIASSI KYHSEFTPLF SPEKFDPPKA 120 FFATAQSIRD ALIINWNATY DYYERLNVKQ AYYLSMEFLQ GRALLNAIGN LGLTGAYAEA 180 LSKLGHNLEN IASQEPDAAL GNGGLGRLAS CFLDSLATLN YPAWGYGLRY RYGLFKQRIT 240 KDGQEEVAEN WLEMSNPWEI VRNDVAYPIK FYGKVLTDSD GKKHWIGGED IQAVAYDVPI 300 PGYETKTTIN LRLWSTKAPS GDFDLSVFNS GKHTQAAEAL YNAEKICYVL YPGDESLEGK 360 ILRLKQQYTL CSASLQDIIA RFERRSGAKV KWDEFPDKVA VQMNDTHPTL CIPELMRILI 420 DVKGLSWNEA WNITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHMEIIE MVDEELIRTI 480 VSEHGKADSN LLEKKLKQMR ILENVELPAA FSDLLVKPKK SPVAVPSDEL GESEEEEEAE 540 AEAEAEEEKE EEKLKPAGGK IKSVKEGTQG KKKKIPEPVP EPPKLVRMAN LCVVGGHAVN 600 GVAAIHSEIV KDEVFNDFFQ LKFWQLWPEK FQNKTNGVTP RRWIRFCNPE LSKIITRWTG 660 SEDWVLNTEK LSELRKFADN EDLQIQWRAA KRSNKLKVAS LIKERTGYIV SPDSMFDIQV 720 KRIHEYKRQL LNILGIVYRY KKMKEMSASE RKKKFVPRVC IFGGKAFATY VQAKRIVKFI 780 TDVGATVNHD PDIGDLLKVI FVPDYNVSVA ELLIPASELS QHISTAGMEA SGTSNMKFAM 840 NGCILIGTLD GANVEIREEV GEENFFLFGA KAHEIAGLRK ERAEGKFVPD PRFEEVKKFI 900 KSGVFGSSNY NELLGSLEGN EGFGRADYFL VGKDFPSYIE CQEKVDETYK DQKVWTRMSI 960 MNTGGSYNFS SDRTIHEYAR EIWNIKPVEL P* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00343 | Phosphorylase | 9.0e-140 | 180 | 503 | 324 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 586 | 985 | 405 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 97 | 504 | 412 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| pfam00343 | Phosphorylase | 0 | 586 | 987 | 407 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| TIGR02093 | P_ylase | 0 | 586 | 985 | 405 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11757.1 | 0 | 59 | 991 | 4 | 935 | alpha-1,4 glucan phosphorylase [Gossypium hirsutum] |
| RefSeq | NP_189578.1 | 0 | 1 | 991 | 1 | 962 | glucan phosphorylase, putative [Arabidopsis thaliana] |
| Swiss-Prot | P53536 | 0 | 51 | 990 | 44 | 1002 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
| RefSeq | XP_002305367.1 | 0 | 53 | 991 | 5 | 949 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002526085.1 | 0 | 20 | 991 | 18 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1z8d_A | 0 | 584 | 987 | 438 | 830 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 1z8d_A | 0 | 92 | 503 | 24 | 433 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_B | 0 | 584 | 986 | 402 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_B | 0 | 147 | 494 | 57 | 395 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| PDB | 2azd_A | 0 | 584 | 986 | 402 | 795 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778303 | 873 | 120 | 992 | 0 |
| HO797178 | 406 | 587 | 992 | 0 |
| HO620767 | 408 | 585 | 992 | 0 |
| HO613954 | 408 | 585 | 992 | 0 |
| HO778303 | 125 | 3 | 122 | 0.000000000000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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