| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.008G254000.1 |
| Family | CBM49 |
| Protein Properties | Length: 627 Molecular Weight: 69410.7 Isoelectric Point: 9.605 |
| Chromosome | Chromosome/Scaffold: 08 Start: 53725585 End: 53729564 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 534 | 611 | 2.7e-39 |
| ITINQKMTTSWNHKGKTYYRYSTVVTNKSYKTVKALKLSISKLYGPIWGLTKSGNSYGFPEWLNTLPAGKSLEFVYIH | |||
| GH9 | 27 | 488 | 0 |
| DYNQALSKSILFFEAQRSGYLPHNQRITWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKQMVANGELGHAMEAVKWGTDYF IKAHPQPYVLYGEVGDGNSDHYCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPAYSRELLRHAYQLFEFADKYRGKYDSSITVAQ KYYRSISGYNDELLWAAAWLYQASNNKYYLNYLAKNGDSMGGTGWAMTEFGWDVKYAGVQTLVAKFLMQGEAGHHAPVFEKYRQKAEYFMCSLIGKGSRN IQKTPGGLIYRQRWNNMQFVTSASFLATVYSDYLTSYRGSLKCAAGNVAPSELLSFAKSQVDYLLGDNPRATSYMVGYGNNYPRQVHHRGSSIVSIKVNP KFVACRQGYATWYTRKASDPNVLTGALVGGPDAYDNFADERDNYEQTEPATYNNAPLLGILA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MGKLMRLISM APLFLLLCLP FAFGGHDYNQ ALSKSILFFE AQRSGYLPHN QRITWRANSG 60 LNDGKASGVD LVGGYYDAGD NVKFGLPMAF TITMMSWSII EYGKQMVANG ELGHAMEAVK 120 WGTDYFIKAH PQPYVLYGEV GDGNSDHYCW QRPEDMTTDR RAYKIDPSNP GSDLAGETAA 180 AMAAASIVFR RSNPAYSREL LRHAYQLFEF ADKYRGKYDS SITVAQKYYR SISGYNDELL 240 WAAAWLYQAS NNKYYLNYLA KNGDSMGGTG WAMTEFGWDV KYAGVQTLVA KFLMQGEAGH 300 HAPVFEKYRQ KAEYFMCSLI GKGSRNIQKT PGGLIYRQRW NNMQFVTSAS FLATVYSDYL 360 TSYRGSLKCA AGNVAPSELL SFAKSQVDYL LGDNPRATSY MVGYGNNYPR QVHHRGSSIV 420 SIKVNPKFVA CRQGYATWYT RKASDPNVLT GALVGGPDAY DNFADERDNY EQTEPATYNN 480 APLLGILARL AGGHGGYNQL LPVVAPAPNP VIAKLKPAPK PKRTPTPASS SSPITINQKM 540 TTSWNHKGKT YYRYSTVVTN KSYKTVKALK LSISKLYGPI WGLTKSGNSY GFPEWLNTLP 600 AGKSLEFVYI HAASPADVSV SSYNLA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 1 | 626 | 629 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 25 | 624 | 609 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 24 | 490 | 469 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 27 | 491 | 465 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 27 | 488 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN04496.2 | 0 | 1 | 626 | 1 | 620 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
| EMBL | CAI68020.1 | 0 | 1 | 626 | 1 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| RefSeq | XP_002270880.1 | 0 | 1 | 626 | 1 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299478.1 | 0 | 1 | 626 | 1 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303645.1 | 0 | 1 | 625 | 1 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 26 | 490 | 3 | 428 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1ksc_A | 0 | 26 | 490 | 3 | 428 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 1ks8_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 20 | 490 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 27 | 496 | 5 | 446 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
