| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G160300.4 |
| Family | GH116 |
| Protein Properties | Length: 686 Molecular Weight: 76731.8 Isoelectric Point: 6.4123 |
| Chromosome | Chromosome/Scaffold: 11 Start: 29340605 End: 29346934 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH116 | 267 | 629 | 0 |
| GRFLYLEGVEYIMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNYGIRKVRGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNS KFVLQVYRDFAATGDMAFGIEVWPAVRTAMEYMEQFDRDDDGLIENDGFPDQTYDAWTVHGVSAYCGCLWLAALQAAAAMAQRLGDKFFAETCKTKFFSA KSAFEKKLWNGSYFNYDSGSSSNSKSIQADQLAGQWYTSSSGLGPIFDEFKTRSSLQKIFDFNVMKVKGGRMGAVNGMHPNGKVDESCMQSREVWTGVTY AVAANMLLAGMEEEAFTTAEGIFIAGWSEEGFGYWFQTPEGWTTNGHYRSLIYMRPLAIWSMQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 686 Download |
| MTAKGNPPVT FAVAASETQN VNVTVLPCFG LTEGSFITAR KIWGKMMQDG QFDRENFNIG 60 PSMPSSPGET LCAAVSASAW VEPHGKCTIA FALAWSSPKI KFSKGSSYHR RYTKFYGTSE 120 RAAVDLVHDA LTNYKHWEEE IEKWQSPILE DIRLPEWYKF TLFNELYFLV AGGTVWIDSS 180 SPSADVKSDQ DPPIKVESKN IKVAEAEMNC RHSTGFEHTS TSGCNSSTGV GLKQNGSSTI 240 PRKKRSCKHF SHHLKTEDQL DGNEDVGRFL YLEGVEYIMW CTYDVHFYAS FALLELFPKI 300 ELNIQRDFAK AVLSEDGRKV KFLAEGNYGI RKVRGAVPHD LGTHDPWNEM NAYNIHDTSK 360 WKDLNSKFVL QVYRDFAATG DMAFGIEVWP AVRTAMEYME QFDRDDDGLI ENDGFPDQTY 420 DAWTVHGVSA YCGCLWLAAL QAAAAMAQRL GDKFFAETCK TKFFSAKSAF EKKLWNGSYF 480 NYDSGSSSNS KSIQADQLAG QWYTSSSGLG PIFDEFKTRS SLQKIFDFNV MKVKGGRMGA 540 VNGMHPNGKV DESCMQSREV WTGVTYAVAA NMLLAGMEEE AFTTAEGIFI AGWSEEGFGY 600 WFQTPEGWTT NGHYRSLIYM RPLAIWSMQW VLSPPKAIIE APKINMMDRI VISPATFSLS 660 LPETRVRKIA NKTACFGNSS LQCTC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0005 | 334 | 424 | 100 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-12 | 67 | 178 | 112 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 5.0e-18 | 10 | 137 | 130 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 7.0e-59 | 263 | 632 | 389 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-148 | 267 | 630 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 685 | 272 | 937 | unnamed protein product [Arabidopsis thaliana] |
| EMBL | CAN61187.1 | 0 | 2 | 685 | 172 | 900 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285674.1 | 0 | 2 | 685 | 286 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 4 | 685 | 279 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 2 | 685 | 286 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 409 | 686 | 0 |
| HO779860 | 150 | 261 | 410 | 0 |
| HO779860 | 105 | 132 | 236 | 0 |
| GT045992 | 338 | 333 | 670 | 0 |
| GT051521 | 331 | 319 | 649 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
