y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G207400.1 |
Family | GH27 |
Protein Properties | Length: 439 Molecular Weight: 48468 Isoelectric Point: 5.9428 |
Chromosome | Chromosome/Scaffold: 11 Start: 49909025 End: 49915284 |
Description | Melibiase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 258 | 369 | 1.9e-29 |
TTIADINDKWASRAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALMKAPLLIGCDVRNMTAETLEILSNKEVISVNQDSLGVQGRKVYVSGEANCLQVW AGPLSGNRLVVA | |||
GH27 | 162 | 262 | 6e-32 |
GAFTCQVRPGSLFHETGDAQLFADWGVDYLKYDNCFNLGIDPKKRYPPMRDALNATGRTIFYSICEWGVEDPALWARGVGNSWRTTDDINDTWASMTTIA D | |||
GH27 | 64 | 168 | 6.5e-33 |
FQLNNGLAVTPQMGWNSWNFFACSISEDLIKETADALVSTGLADLGYVYVNIDDCWSAATRNLKGQLVPDPKTFPSGIKALSDYVHGKGLKLGIYGDAGA FTCQV |
Full Sequence |
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Protein Sequence Length: 439 Download |
MGMENMKKKK SVYSVYIVMV LTLRLIDGGI EGRQVGVLEK LEKPSSGFSK SYNSIYDTSK 60 YGIFQLNNGL AVTPQMGWNS WNFFACSISE DLIKETADAL VSTGLADLGY VYVNIDDCWS 120 AATRNLKGQL VPDPKTFPSG IKALSDYVHG KGLKLGIYGD AGAFTCQVRP GSLFHETGDA 180 QLFADWGVDY LKYDNCFNLG IDPKKRYPPM RDALNATGRT IFYSICEWGV EDPALWARGV 240 GNSWRTTDDI NDTWASMTTI ADINDKWASR AGPGGWNDPD MLEVGNGGMT YQEYRAHFSI 300 WALMKAPLLI GCDVRNMTAE TLEILSNKEV ISVNQDSLGV QGRKVYVSGE ANCLQVWAGP 360 LSGNRLVVAF WNRCLKAATI TARWEVLGLE SSTNVSIRDL WQHKEVKENA VASFGAKVDS 420 HDCHMYIFTP KTVAHSES* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 2.0e-26 | 47 | 340 | 374 | + Melibiase. | ||
PLN03231 | PLN03231 | 2.0e-27 | 74 | 339 | 356 | + putative alpha-galactosidase; Provisional | ||
PLN02692 | PLN02692 | 6.0e-177 | 66 | 430 | 366 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 21 | 436 | 416 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 66 | 431 | 367 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU86897.1 | 0 | 6 | 430 | 1 | 424 | glycosyl hydrolase family-like protein [Salvia miltiorrhiza] |
EMBL | CAB87430.1 | 0 | 6 | 437 | 1 | 433 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191190.2 | 0 | 3 | 437 | 1 | 436 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002279730.1 | 0 | 14 | 436 | 5 | 425 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325481.1 | 0 | 51 | 430 | 1 | 380 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 66 | 430 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 67 | 406 | 2 | 369 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 66 | 433 | 1 | 389 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 66 | 433 | 1 | 389 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 0 | 61 | 415 | 17 | 411 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES791126 | 332 | 25 | 356 | 0 |
HO780204 | 339 | 97 | 435 | 0 |
HO804702 | 307 | 130 | 436 | 0 |
CO096715 | 252 | 47 | 298 | 0 |
EX415077 | 294 | 81 | 374 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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