Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G207400.3 |
Family | GH27 |
Protein Properties | Length: 420 Molecular Weight: 46531.8 Isoelectric Point: 6.4014 |
Chromosome | Chromosome/Scaffold: 11 Start: 49909039 End: 49915284 |
Description | Melibiase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 64 | 155 | 3.1e-27 |
FQLNNGLAVTPQMGWNSWNFFACSISEDLIKETDDCWSAATRNLKGQLVPDPKTFPSGIKALSDYVHGKGLKLGIYGDAGAFTCQVRPGSLF | |||
GH27 | 143 | 350 | 0 |
GAFTCQVRPGSLFHETGDAQLFADWGVDYLKYDNCFNLGIDPKKRYPPMRDALNATGRTIFYSICEWGVEDPALWARGVGNSWRTTDDINDTWASMTTIA DINDKWASRAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALMKAPLLIGCDVRNMTAETLEILSNKEVISVNQDSLGVQGRKVYVSGEANCLQVWAGPL SGNRLVVA |
Full Sequence |
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Protein Sequence Length: 420 Download |
MGMENMKKKK SVYSVYIVMV LTLRLIDGGI EGRQVGVLEK LEKPSSGFSK SYNSIYDTSK 60 YGIFQLNNGL AVTPQMGWNS WNFFACSISE DLIKETDDCW SAATRNLKGQ LVPDPKTFPS 120 GIKALSDYVH GKGLKLGIYG DAGAFTCQVR PGSLFHETGD AQLFADWGVD YLKYDNCFNL 180 GIDPKKRYPP MRDALNATGR TIFYSICEWG VEDPALWARG VGNSWRTTDD INDTWASMTT 240 IADINDKWAS RAGPGGWNDP DMLEVGNGGM TYQEYRAHFS IWALMKAPLL IGCDVRNMTA 300 ETLEILSNKE VISVNQDSLG VQGRKVYVSG EANCLQVWAG PLSGNRLVVA FWNRCLKAAT 360 ITARWEVLGL ESSTNVSIRD LWQHKEVKEN AVASFGAKVD SHDCHMYIFT PKTVAHSES* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 3.0e-20 | 74 | 320 | 355 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 2.0e-21 | 47 | 321 | 369 | + Melibiase. | ||
PLN02692 | PLN02692 | 2.0e-160 | 66 | 411 | 366 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 4.0e-177 | 66 | 412 | 367 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 21 | 417 | 416 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU86897.1 | 0 | 6 | 411 | 1 | 424 | glycosyl hydrolase family-like protein [Salvia miltiorrhiza] |
EMBL | CAB87430.1 | 0 | 6 | 418 | 1 | 433 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191190.2 | 0 | 3 | 418 | 1 | 436 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002279730.1 | 0 | 14 | 417 | 5 | 425 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325481.1 | 0 | 51 | 411 | 1 | 380 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 66 | 411 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 67 | 387 | 2 | 369 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 66 | 414 | 1 | 389 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 66 | 414 | 1 | 389 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 0 | 61 | 396 | 17 | 411 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES791126 | 332 | 25 | 337 | 0 |
HO780204 | 320 | 97 | 416 | 0 |
HO804702 | 307 | 111 | 417 | 0 |
GE480858 | 303 | 111 | 413 | 0 |
JG216918 | 292 | 120 | 411 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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