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Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os02g04670.1 |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 53374.5 Isoelectric Point: 5.073 |
Chromosome | Chromosome/Scaffold: 2 Start: 2096202 End: 2101457 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 450 | 4.2e-26 |
WCVLKPSIGLTDPRLSDSISYACSLADCTSLGYKTSCGGLDTRSNISYAFNSYYQKNDQDDVACGFSNLATITGQDPSTGTC | |||
GH17 | 32 | 349 | 0 |
IGANWGTQASHPLAPDTVVQMLKDNGFDKVKLFDAGEDTMSALRKSGLEVMVGIPNDMLAAMASSMAAANKWVDQNVSNYLNDGVKIRYVAVGNEPFLET YNGSFLQTTFPAIRNIQSALVKAGLGSQVRVTCPLNADVYQSSTSKPSDGDFRTDIHDLMLTIVKFLSDTGGAFTVNIYPFISLYSDSNFPVDYAFFDGA ASPIVDGSATYTNMFDANYDTLIWALKKNGFGNLPVIVGEIGWPTDGDMNANIQMAQHFNQGFLTHIATGRGTPMRPGPVDAYLFSLIDEDEKSIQPGNF ERHWGIFTYDGLPKYQLN |
Full Sequence |
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Protein Sequence Length: 490 Download |
MGSSWWWHGR AAAAVACWVW LAAAAAVGVE AIGANWGTQA SHPLAPDTVV QMLKDNGFDK 60 VKLFDAGEDT MSALRKSGLE VMVGIPNDML AAMASSMAAA NKWVDQNVSN YLNDGVKIRY 120 VAVGNEPFLE TYNGSFLQTT FPAIRNIQSA LVKAGLGSQV RVTCPLNADV YQSSTSKPSD 180 GDFRTDIHDL MLTIVKFLSD TGGAFTVNIY PFISLYSDSN FPVDYAFFDG AASPIVDGSA 240 TYTNMFDANY DTLIWALKKN GFGNLPVIVG EIGWPTDGDM NANIQMAQHF NQGFLTHIAT 300 GRGTPMRPGP VDAYLFSLID EDEKSIQPGN FERHWGIFTY DGLPKYQLNL GQSHGLLKAK 360 NVKYLERKWC VLKPSIGLTD PRLSDSISYA CSLADCTSLG YKTSCGGLDT RSNISYAFNS 420 YYQKNDQDDV ACGFSNLATI TGQDPSTGTC RFGIMIEVDS AFSWKLQHVR SSNLLMLLLV 480 LLQLCLSFS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-5 | 263 | 341 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-16 | 368 | 439 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-31 | 368 | 452 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-71 | 35 | 349 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005488 | binding |
GO:0005575 | cellular_component |
GO:0005886 | plasma membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY84415.1 | 0 | 1 | 489 | 1 | 492 | hypothetical protein OsI_05789 [Oryza sativa Indica Group] |
RefSeq | NP_001045844.1 | 0 | 1 | 489 | 1 | 489 | Os02g0139300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151032.1 | 0 | 35 | 467 | 36 | 471 | glucan endo-1,3-beta-glucosidase 6 [Zea mays] |
RefSeq | XP_002331390.1 | 0 | 28 | 457 | 10 | 443 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530371.1 | 0 | 20 | 457 | 12 | 451 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 32 | 350 | 1 | 306 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1aq0_B | 0 | 32 | 350 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 32 | 350 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_B | 0 | 30 | 350 | 1 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3ur8_A | 0 | 30 | 350 | 1 | 314 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |