| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g48480.1 |
| Family | GT47 |
| Protein Properties | Length: 475 Molecular Weight: 52780.4 Isoelectric Point: 8.0407 |
| Chromosome | Chromosome/Scaffold: 4 Start: 28900687 End: 28902796 |
| Description | glycosyltransferase 18 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 70 | 409 | 0 |
| GLVYVYDLPPVFNEDLLALCEVLAPMYSLCPYLANDGLGFPAKGGNQSEFPPAELVGSWYSSDQFALEHIVHRRLLSHRCRTTDPARATAFFVPFYAGLA VGRHLWATNATDADRDRDCLALLSWLHAQPYYKRSNGWDHFIALGRITWDFRRSPDGGWGGSFLLMPGLANTTRLVIERDPWDAMDVGIPYPTSFHPRTA ADVRAWQQYASSRSRPKLFAFAGAPRSAIKGDFRGLLLEECQAAGDACGALDCGEGRCIKQNELVMELFLGARFCLQPRGDSFTRRSLFDCMVGGAVPVL FWRRSAYRQYGWYVPVGNSQEEEWSVFIDRDELRAGNVTV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 475 Download |
| MAAMYRPDPA NPAARRPRLV VLLLVAFFAL QLLVFLAFRG APSPSSPDAA VDRVPVSARR 60 DGEDSGCVGG LVYVYDLPPV FNEDLLALCE VLAPMYSLCP YLANDGLGFP AKGGNQSEFP 120 PAELVGSWYS SDQFALEHIV HRRLLSHRCR TTDPARATAF FVPFYAGLAV GRHLWATNAT 180 DADRDRDCLA LLSWLHAQPY YKRSNGWDHF IALGRITWDF RRSPDGGWGG SFLLMPGLAN 240 TTRLVIERDP WDAMDVGIPY PTSFHPRTAA DVRAWQQYAS SRSRPKLFAF AGAPRSAIKG 300 DFRGLLLEEC QAAGDACGAL DCGEGRCIKQ NELVMELFLG ARFCLQPRGD SFTRRSLFDC 360 MVGGAVPVLF WRRSAYRQYG WYVPVGNSQE EEWSVFIDRD ELRAGNVTVR GVLAAIPEAK 420 VREMRNRVVE MIPKLVYSAA DKEGLGDGMK DAVDVMIDGM LRRAAEQRRS WRKV* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-60 | 67 | 416 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008152 | metabolic process |
| GO:0009536 | plastid |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN35419.1 | 0 | 3 | 474 | 2 | 476 | unknown [Zea mays] |
| EMBL | CAD41668.3 | 0 | 4 | 474 | 1 | 471 | OSJNBa0019K04.15 [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY95237.1 | 0 | 4 | 474 | 1 | 471 | hypothetical protein OsI_17054 [Oryza sativa Indica Group] |
| RefSeq | NP_001053616.1 | 0 | 1 | 474 | 1 | 474 | Os04g0574100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002446968.1 | 0 | 3 | 474 | 2 | 479 | hypothetical protein SORBIDRAFT_06g026020 [Sorghum bicolor] |
