Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10005166 |
Family | CBM43 |
Protein Properties | Length: 531 Molecular Weight: 55875.3 Isoelectric Point: 7.7126 |
Chromosome | Chromosome/Scaffold: 370 Start: 210203 End: 214211 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 448 | 526 | 2.9e-28 |
WCVAKAGAAAPTLQSNIDYACGNGADCKPIEAGGSCFEPNNVATHATFAMNAYYRAKGGLQATCGFANTGLLTTVDPSK | |||
GH17 | 23 | 336 | 0 |
IGINYGTLGDNLPTPAKVANFLKTKTIIDSVKLFDANPDILRAFANTGLSVTVTIANGQIPSLTNLDNAKGWIAKNIAPYHPQTKINRILVGNEIMATLD DNLISNLVPAMKSVHQALLGSGINDVQVTTAHSMGILKVSEPPSAGKFWPGHDVAIYGPMLQFLRQTKSPFMVNPYSYFGYSPSMANYALFRPNAGIPDP ATGITYSNMFDATLDATYSAMKKLGYKDVDLIVGETGWPTQCLPQQLECTTENAAWYNSQLVRRVVEGVGTPLEPKRRIGIFLFALFNENLKPGPITEQH WGLFEPNMTPVYDC |
Full Sequence |
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Protein Sequence Length: 531 Download |
MGTINPLYRL VAILCISATA SAIGINYGTL GDNLPTPAKV ANFLKTKTII DSVKLFDANP 60 DILRAFANTG LSVTVTIANG QIPSLTNLDN AKGWIAKNIA PYHPQTKINR ILVGNEIMAT 120 LDDNLISNLV PAMKSVHQAL LGSGINDVQV TTAHSMGILK VSEPPSAGKF WPGHDVAIYG 180 PMLQFLRQTK SPFMVNPYSY FGYSPSMANY ALFRPNAGIP DPATGITYSN MFDATLDATY 240 SAMKKLGYKD VDLIVGETGW PTQCLPQQLE CTTENAAWYN SQLVRRVVEG VGTPLEPKRR 300 IGIFLFALFN ENLKPGPITE QHWGLFEPNM TPVYDCGILR DKQNDEGKSG NSSAHRVEEE 360 ETSGSDDDTT KSSNSGPVSA PLSSPDPPPA PGNIPKPAPK SASSSSGATH LTISFSSAPL 420 AQAGRQGGGV GRKGGGAPAA VGSGGKKWCV AKAGAAAPTL QSNIDYACGN GADCKPIEAG 480 GSCFEPNNVA THATFAMNAY YRAKGGLQAT CGFANTGLLT TVDPSKYIPS * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.005 | 61 | 329 | 275 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-18 | 448 | 517 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-33 | 448 | 525 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-83 | 23 | 335 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24695.1 | 0 | 1 | 525 | 5 | 476 | unknown [Picea sitchensis] |
RefSeq | XP_002312098.1 | 0 | 19 | 339 | 26 | 346 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312098.1 | 2e-22 | 445 | 524 | 367 | 446 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530863.1 | 0 | 7 | 343 | 11 | 347 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530863.1 | 6e-25 | 438 | 526 | 363 | 451 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 23 | 334 | 1 | 302 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1aq0_B | 0 | 23 | 334 | 1 | 302 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 23 | 334 | 1 | 302 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 23 | 336 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 23 | 338 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |