Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10005566 |
Family | GT47 |
Protein Properties | Length: 483 Molecular Weight: 55576.1 Isoelectric Point: 8.651 |
Chromosome | Chromosome/Scaffold: 2324 Start: 112165 End: 113613 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 86 | 422 | 0 |
MSVYVYDLPSKFNADLLHNCAHLNNYGSMCPHVANRGLGQPLFRRGSDHAGDDQYVWFATNQFTGEEIFHSRMENHPCRSKDPSRASLFYVPFYGGFHMS SKMREVNHTARDELAMQLADYVKLQPWWHRRNGKDHFMVLGRTAWDFMRPDQDRPDRWNDYGPNNLFSHPTVKNMSVFVLERHPWQGHNQHGIPYPSYFH PSTSDQLAHWQRIVQESKRPYLFSFVGAKRKEGESAAIRDELMRQCSDSKRCNMINCTTNLAQCNNPARVLRAMKESQFCLQARGDSFTRRSLFDSILAG CIPVVFSRHTAYTQYEMYLPDDTRSYSVFIEEEEVVG |
Full Sequence |
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Protein Sequence Length: 483 Download |
MAKEQTFHFK NTTFLPNPPY KLLILLFLFF SLWSLLLQSY SRPFLRKSSI SSRTGDVGAH 60 IVAPNVVNQN VDKVNDSKLV SCPHNMSVYV YDLPSKFNAD LLHNCAHLNN YGSMCPHVAN 120 RGLGQPLFRR GSDHAGDDQY VWFATNQFTG EEIFHSRMEN HPCRSKDPSR ASLFYVPFYG 180 GFHMSSKMRE VNHTARDELA MQLADYVKLQ PWWHRRNGKD HFMVLGRTAW DFMRPDQDRP 240 DRWNDYGPNN LFSHPTVKNM SVFVLERHPW QGHNQHGIPY PSYFHPSTSD QLAHWQRIVQ 300 ESKRPYLFSF VGAKRKEGES AAIRDELMRQ CSDSKRCNMI NCTTNLAQCN NPARVLRAMK 360 ESQFCLQARG DSFTRRSLFD SILAGCIPVV FSRHTAYTQY EMYLPDDTRS YSVFIEEEEV 420 VGRKMNVEKE LEKIGSLEVG EMRKVVVDLI PRLTFAHPDA GGDKGFDDAV DVAISSLLRK 480 LK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-61 | 82 | 434 | 367 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42883.1 | 0 | 81 | 482 | 66 | 448 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_177014.1 | 0 | 81 | 482 | 66 | 448 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270383.1 | 0 | 88 | 477 | 125 | 495 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300452.1 | 0 | 82 | 480 | 1 | 394 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336132.1 | 0 | 69 | 480 | 4 | 415 | predicted protein [Populus trichocarpa] |