Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10006659 |
Family | GH17 |
Protein Properties | Length: 302 Molecular Weight: 33354.9 Isoelectric Point: 5.1593 |
Chromosome | Chromosome/Scaffold: 345 Start: 212345 End: 213250 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 2 | 257 | 0 |
SSNASNAMSWVKENVEQFMPNSDICGIAIGNEVLGGGDIELYGALLGAAKNIHSALDKLGLSDTVQISTAHSQAVFSNSYPPSSCVFRENIAQYMKPLMQ FFWETGSPFCLNVYPFLAYMSDPENIDINYALFQKTKGIYDPKTDLHYDNMLDAQIDATYAALEDAGFDKMEVIVTETGWASRGDNNEAAATVENARTYN FNLRKRLAKKKGTPMRPKNIVKAYVFAIFNENLKPGPTSERNFGLFKPDGSISYDV |
Full Sequence |
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Protein Sequence Length: 302 Download |
MSSNASNAMS WVKENVEQFM PNSDICGIAI GNEVLGGGDI ELYGALLGAA KNIHSALDKL 60 GLSDTVQIST AHSQAVFSNS YPPSSCVFRE NIAQYMKPLM QFFWETGSPF CLNVYPFLAY 120 MSDPENIDIN YALFQKTKGI YDPKTDLHYD NMLDAQIDAT YAALEDAGFD KMEVIVTETG 180 WASRGDNNEA AATVENARTY NFNLRKRLAK KKGTPMRPKN IVKAYVFAIF NENLKPGPTS 240 ERNFGLFKPD GSISYDVGYK GLKSSSADSI VLSLKVIDVH VPACLHQYEW PYDRIICCLP 300 A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.007 | 171 | 250 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-72 | 2 | 259 | 258 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 1 | 280 | 94 | 373 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | NP_850082.1 | 0 | 1 | 281 | 1 | 281 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282272.1 | 0 | 1 | 277 | 94 | 368 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 1 | 267 | 70 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 1 | 261 | 78 | 338 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 3 | 259 | 64 | 315 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3f55_C | 0 | 3 | 259 | 64 | 315 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3f55_B | 0 | 3 | 259 | 64 | 315 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3f55_A | 0 | 3 | 259 | 64 | 315 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 3em5_D | 0 | 3 | 259 | 64 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FY444355 | 262 | 1 | 262 | 0 |
DT559271 | 263 | 1 | 263 | 0 |
DT559272 | 262 | 1 | 262 | 0 |
DW114601 | 259 | 1 | 259 | 0 |
EL465194 | 259 | 5 | 263 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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