| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10029959 |
| Family | GT19 |
| Protein Properties | Length: 458 Molecular Weight: 50354.5 Isoelectric Point: 8.3377 |
| Chromosome | Chromosome/Scaffold: 416 Start: 832793 End: 834847 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT19 | 41 | 417 | 0 |
| VFLVAGEVSGDAIGSRLMDSLKKLSPFPVRFSGVGGSMMCKEGMESLFPIEDISVMGLWELLPHLNKFRVRLRETVDAAVLFRPHCIVTVDSKGFSFRFL KQLRARNIGEGSSKSPVHFHYVAPSFWAWKGGEARLKGLTKFVDHVFCILPNEAAVCQLNGLAATFVGHPVLEDLLELNSGKQEWRIQGNPDNFRSRFGI SKDAKVISLLPGSRLQEVTRMLPIFTEAIDELQHSFSNLVTVIHVAPNQDVEDFLGGAVSKWPAPAVLVPGGDSILKYDAFSASKVALCTSGTVAVELQL ARLPCAVAYRANILTEWFVRYKAKIQYISLPNILMDSPVVPESLFRSCTPTNLAAILAELLRNEKGEQEEQIAAAEK | |||
| Full Sequence |
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| Protein Sequence Length: 458 Download |
| MLLKAFRTAK NHPISVCLSW LHIRRHFSVS SSAAKDGELR VFLVAGEVSG DAIGSRLMDS 60 LKKLSPFPVR FSGVGGSMMC KEGMESLFPI EDISVMGLWE LLPHLNKFRV RLRETVDAAV 120 LFRPHCIVTV DSKGFSFRFL KQLRARNIGE GSSKSPVHFH YVAPSFWAWK GGEARLKGLT 180 KFVDHVFCIL PNEAAVCQLN GLAATFVGHP VLEDLLELNS GKQEWRIQGN PDNFRSRFGI 240 SKDAKVISLL PGSRLQEVTR MLPIFTEAID ELQHSFSNLV TVIHVAPNQD VEDFLGGAVS 300 KWPAPAVLVP GGDSILKYDA FSASKVALCT SGTVAVELQL ARLPCAVAYR ANILTEWFVR 360 YKAKIQYISL PNILMDSPVV PESLFRSCTP TNLAAILAEL LRNEKGEQEE QIAAAEKVIR 420 LLFPPVGILE TSDVAERNVP HCSPSMIAAS TILSHVN* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 3.0e-36 | 42 | 422 | 390 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 9.0e-52 | 41 | 411 | 374 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 3.0e-74 | 41 | 422 | 382 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 4.0e-103 | 39 | 437 | 401 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 3.0e-104 | 39 | 403 | 366 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 33 | 455 | 2 | 428 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 29 | 453 | 29 | 459 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 28 | 455 | 29 | 452 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 29 | 453 | 9 | 439 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 21 | 456 | 23 | 467 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG141729 | 205 | 254 | 458 | 0 |
| EY717263 | 303 | 77 | 372 | 0 |
| EE622357 | 255 | 88 | 342 | 0 |
| FY429474 | 239 | 28 | 266 | 0 |
| EY717263 | 44 | 333 | 376 | 0.00002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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