| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_10429028g0020 |
| Family | PL1 |
| Protein Properties | Length: 239 Molecular Weight: 26871.6 Isoelectric Point: 7.0383 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| PL1 | 123 | 230 | 1.2e-22 |
| AVIQTEPLWIIFQRDMVIMLKEELIMNSYKTIDGRGVNVHIANGPCITVQYVTNIIIHGIHIHDCRPAGNAMVRSTPSHYGWRTMCDGDGVSIFGGTHVW VDHYSLSX | |||
| Full Sequence |
|---|
| Protein Sequence Length: 239 Download |
| MAKSSIVVGY FLFVVILAGL EFIRAQSSNS SAVEDPEMVV EMVERSINSS RRQLGYFSCG 60 TGNPIDDCWR CDPDWERNRK RLADCGIGFG RNAIGGRNGR FYLVTDPRDD DPVNPRPGTL 120 RHAVIQTEPL WIIFQRDMVI MLKEELIMNS YKTIDGRGVN VHIANGPCIT VQYVTNIIIH 180 GIHIHDCRPA GNAMVRSTPS HYGWRTMCDG DGVSIFGGTH VWVDHYSLSX XXXITHSHF 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00544 | Pec_lyase_C | 3.0e-17 | 143 | 229 | 102 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 1.0e-20 | 137 | 229 | 95 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR17791.1 | 0 | 1 | 229 | 1 | 229 | unknown [Picea sitchensis] |
| GenBank | ABR18032.1 | 0 | 45 | 229 | 9 | 193 | unknown [Picea sitchensis] |
| GenBank | ADD62392.1 | 0 | 26 | 229 | 58 | 263 | pectase lyase [Prunus persica] |
| DDBJ | BAF43573.1 | 0 | 26 | 229 | 38 | 243 | pectate lyase [Prunus persica] |
| RefSeq | XP_002518146.1 | 0 | 28 | 229 | 66 | 269 | Pectate lyase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 63 | 229 | 2 | 169 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 63 | 229 | 2 | 169 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 5 | 23 | |||
| Signal Peptide | ||||
|---|---|---|---|---|
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| Cleavage Site | ||||
| 0 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EX330352 | 229 | 1 | 229 | 0 |
| DV972747 | 229 | 1 | 229 | 0 |
| GT741978 | 229 | 1 | 229 | 0 |
| GE481779 | 222 | 8 | 229 | 0 |
| DV984437 | 222 | 8 | 229 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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