Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10437227g0030 |
Family | PL1 |
Protein Properties | Length: 446 Molecular Weight: 49043.5 Isoelectric Point: 6.7579 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
PL1 | 312 | 446 | 2.5e-39 |
GVNVHIANGPCITVQYVSHVIIHGIHVHDCKPAGNAMVRDSPTHYGWRTISDGDGISIFGGSDIWVDHVSLSNCADGLIDAIMGSTDITISNSYFTHHDK AMLLGASDSYTPDVKMRVTIAYNHFGEGLVQRMPR | |||
PL1 | 141 | 319 | 3.64338e-44 |
AVIQSEPLWIIFKRDMVIQLKEELIMNSYKTIDGRGVNVHIANGPCITVQYVSHIIIHGIHVHDCKPQGNAMVRDSPTHYGWRTICDGDGISIFGGSHIW VDHVSLSNCADGLIDAIMGSTAITISNSYFTHHDEVMLLGHSDSYTPDVNMQVTIAYNHFGEGAGMXXXXRGVNVHIAN |
Full Sequence |
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Protein Sequence Length: 446 Download |
MKKQSILSCM LLIGILCIQS EAATKPFGSM VAQNSRKAKT SNANTTAVEK DPDSVVQMVQ 60 RSIDNSTRRR ELGYLSCGTG NPIDDCWRCD PNWENNRKRL ADCAIGFGRD ALGGKNGRFY 120 LVTDPNDYDA VNPRPGTLRH AVIQSEPLWI IFKRDMVIQL KEELIMNSYK TIDGRGVNVH 180 IANGPCITVQ YVSHIIIHGI HVHDCKPQGN AMVRDSPTHY GWRTICDGDG ISIFGGSHIW 240 VDHVSLSNCA DGLIDAIMGS TAITISNSYF THHDEVMLLG HSDSYTPDVN MQVTIAYNHF 300 GEGAGMXXXX RGVNVHIANG PCITVQYVSH VIIHGIHVHD CKPAGNAMVR DSPTHYGWRT 360 ISDGDGISIF GGSDIWVDHV SLSNCADGLI DAIMGSTDIT ISNSYFTHHD KAMLLGASDS 420 YTPDVKMRVT IAYNHFGEGL VQRMPR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 2.0e-14 | 376 | 446 | 80 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 7.0e-27 | 311 | 446 | 145 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 2.0e-28 | 311 | 446 | 145 | + Amb_all domain. | ||
pfam00544 | Pec_lyase_C | 3.0e-37 | 161 | 319 | 182 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 1.0e-45 | 155 | 319 | 176 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR17766.1 | 0 | 1 | 303 | 1 | 300 | unknown [Picea sitchensis] |
GenBank | ABR17766.1 | 0 | 311 | 446 | 173 | 307 | unknown [Picea sitchensis] |
GenBank | ABR17909.1 | 0 | 1 | 302 | 1 | 302 | unknown [Picea sitchensis] |
GenBank | ABR17909.1 | 0 | 311 | 446 | 175 | 310 | unknown [Picea sitchensis] |
RefSeq | XP_002297822.1 | 0 | 18 | 303 | 45 | 324 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 81 | 319 | 2 | 242 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_B | 1e-33 | 311 | 446 | 95 | 232 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 81 | 319 | 2 | 242 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 1e-33 | 311 | 446 | 95 | 232 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 0.000000002 | 312 | 446 | 74 | 200 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |