| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_137974g0010 |
| Family | PL1 |
| Protein Properties | Length: 178 Molecular Weight: 19302.9 Isoelectric Point: 7.5833 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 46 | 177 | 1.1e-32 |
| VFAKDMNIKLQMPLFVTSHKTIDGRGAKVHISNGPCIRLWNVSNVVSHGLHIHDCKPSVAGNVLVTETVSSISTGVEWMESQDGDAISVVSCRDMWIDHN TLSNCADGLVDVTLASTAVTISNNRFSYHDKA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 178 Download |
| MGFGSAAYGG KEGEIYTVTT PNDNPTKPLP GSLRYGVTRK RPLWIVFAKD MNIKLQMPLF 60 VTSHKTIDGR GAKVHISNGP CIRLWNVSNV VSHGLHIHDC KPSVAGNVLV TETVSSISTG 120 VEWMESQDGD AISVVSCRDM WIDHNTLSNC ADGLVDVTLA STAVTISNNR FSYHDKAS 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 9.0e-10 | 9 | 178 | 179 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 3.0e-23 | 56 | 177 | 145 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 5.0e-30 | 50 | 178 | 140 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF72626.1 | 0 | 1 | 176 | 47 | 218 | AF257492_1 Cup s 1 pollen allergen precursor [Cupressus sempervirens] |
| GenBank | AAF72628.1 | 0 | 1 | 176 | 47 | 218 | AF257494_1 Cup s 1 pollen allergen precursor [Cupressus sempervirens] |
| GenBank | AAF72629.1 | 0 | 1 | 176 | 47 | 218 | AF257495_1 Cup s 1 pollen allergen precursor [Cupressus sempervirens] |
| GenBank | ABK78766.1 | 0 | 1 | 176 | 27 | 198 | major allergen Cup a 1 [Hesperocyparis arizonica] |
| EMBL | CAC48400.1 | 0 | 1 | 176 | 47 | 218 | putative allergen jun o 1 [Juniperus oxycedrus] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 1 | 176 | 26 | 197 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 1 | 176 | 26 | 197 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 3zsc_A | 0.00001 | 86 | 178 | 76 | 165 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1vbl_A | 0.003 | 54 | 178 | 123 | 255 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1pcl_A | 0.006 | 54 | 176 | 71 | 197 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| EE506815 | 177 | 1 | 176 | 0 |
| CX528139 | 177 | 1 | 176 | 0 |
| EX053435 | 176 | 1 | 176 | 0 |
| DW477858 | 177 | 1 | 176 | 0 |
| ES900930 | 177 | 1 | 176 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Malus domestica | MDP0000202902 | ||||
| Picea abies | MA_10394547g0010 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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