| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_143414g0070 |
| Family | GH110 |
| Protein Properties | Length: 1075 Molecular Weight: 117371 Isoelectric Point: 7.0759 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH110 | 94 | 626 | 2.8026e-45 |
| SVQRGIDQAYRGGLHKVVVPPGVYHLTTESSSGSHLHLAGTKDFEIDATGATFILSTPRKGGVDFHGCQDVTLKGATLVRDPLPFSQGRIVALGADYQQI DVQVDKGYPADFDDKQSYAKLSLNSYDGEHNRRWEDDLWSARDVERLGPDTFRFHAGRCVGADSTWKMGSAVAWRGWGGADIAVTGCRGMRIDGVTIKNG AGFCVAESGGEGGNYYNYTVTYGPRPEGATAEPILASNADAFHSKSVRKGPTLEDCHFEGMNDDGIPIHGQYALIEQVEGNQFIVETKNYPFCQAGDHLR FLDERGALAGEARVVSVVDVPVFTPPAPAPRDLRLFQDLTKHQYTRITLDTAAAAKFGWLVANADANGDGFVVRRCTIRSHRARGMLIKASDGLIEDCTV EGSSIGGIVIAPEMDFWDESDFARNIVVRHNTIRDCDYWHQEGTSQAGAMTVDAFVAKRFVPLPGGHRHLLIEDNTFEENNGTNLVVSSAQDVIIRRNRF VRPMQKENGRGKARGVNPQALIWLTECSGIQLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1075 Download |
| AVSYDDGATW PVQRLITPDG AARQIRGGDR GLVRLDAHHA ELGGYLASCQ EQNGRIDLIT 60 SRNHYAFNLA WLTQRVAPVP GAPPIVISPA DPASVQRGID QAYRGGLHKV VVPPGVYHLT 120 TESSSGSHLH LAGTKDFEID ATGATFILST PRKGGVDFHG CQDVTLKGAT LVRDPLPFSQ 180 GRIVALGADY QQIDVQVDKG YPADFDDKQS YAKLSLNSYD GEHNRRWEDD LWSARDVERL 240 GPDTFRFHAG RCVGADSTWK MGSAVAWRGW GGADIAVTGC RGMRIDGVTI KNGAGFCVAE 300 SGGEGGNYYN YTVTYGPRPE GATAEPILAS NADAFHSKSV RKGPTLEDCH FEGMNDDGIP 360 IHGQYALIEQ VEGNQFIVET KNYPFCQAGD HLRFLDERGA LAGEARVVSV VDVPVFTPPA 420 PAPRDLRLFQ DLTKHQYTRI TLDTAAAAKF GWLVANADAN GDGFVVRRCT IRSHRARGML 480 IKASDGLIED CTVEGSSIGG IVIAPEMDFW DESDFARNIV VRHNTIRDCD YWHQEGTSQA 540 GAMTVDAFVA KRFVPLPGGH RHLLIEDNTF EENNGTNLVV SSAQDVIIRR NRFVRPMQKE 600 NGRGKARGVN PQALIWLTEC SGIQLLGNSV VDPGPFLKVS VEATATATGT GFTDGVSPIR 660 LFPLASPTFL AKYASPCGPP ESSRGAKRVD PWLFRPGGKH RKAHVGNQFG VLAQLVERLN 720 GIEIKVVFRS FDHTLSHVVA YQQNPQGRLS LPLQKTTLSA IVCVLGVPPP AGCPAVVTTQ 780 EKLAVKLQEA AAMLSMSEST LRRKIEAREI AVCRASRHIT IAVEELKRFL ARNTVNHSPA 840 IMANISFDGR EPVQLTWGAD GKLVAAHALD SNERRTFGGE NASPSTVGDF PHRAYPSFQF 900 LATRERKGPA RNGFLLSSCT DSTDMLLCLN VRIHGEQDHM NPNSIRSGVI DCRLGFLARS 960 MMAKQPVRIL IEQTAHRNWV SALFLRVGWE ADQAVVGAAC DVLNNADGFA PVCECLLEES 1020 EKIRLAMLLH ADFWERISAS RDVKQRDLLD LGLNVGTASA VGKRFERMEL EIDRM 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05048 | NosD | 0.0002 | 460 | 629 | 171 | + Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain. | ||
| pfam12728 | HTH_17 | 5.0e-5 | 788 | 834 | 48 | + Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain. | ||
| pfam13229 | Beta_helix | 1.0e-8 | 460 | 630 | 173 | + Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. | ||
| pfam13229 | Beta_helix | 9.0e-9 | 460 | 632 | 175 | + Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | ZP_01874996.1 | 3e-40 | 106 | 593 | 17 | 509 | hypothetical protein LNTAR_21165 [Lentisphaera araneosa HTCC2155] |
| RefSeq | ZP_03723352.1 | 1.00053e-42 | 83 | 599 | 31 | 562 | hypothetical protein ObacDRAFT_9770 [Opitutaceae bacterium TAV2] |
| RefSeq | ZP_06241688.1 | 0 | 82 | 656 | 25 | 593 | hypothetical protein Vvad_PD3300 [Victivallis vadensis ATCC BAA-548] |
| RefSeq | ZP_06245028.1 | 0 | 95 | 656 | 21 | 581 | hypothetical protein Vvad_PD0287 [Victivallis vadensis ATCC BAA-548] |
| RefSeq | ZP_06245129.1 | 7.00649e-43 | 90 | 623 | 18 | 549 | Alpha-galactosidase [Victivallis vadensis ATCC BAA-548] |
| Hydropathy |
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