| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_158760g0070 |
| Family | GH23 |
| Protein Properties | Length: 257 Molecular Weight: 27303.3 Isoelectric Point: 10.3183 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH23 | 71 | 176 | 4.9e-29 |
| PIAWIRAVMRAESAGDPRALSPKGAMGLMQIMPPTWAGLRLRHRLGADPYDPHDNIIAGAGYIRELFDRYGSPGWIAAYNAGPGRYEDSLKGRALPAETR AYVAIV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 257 Download |
| MLGSRQPRSR SIASGPRCAA RRMALLLLSG LSLASIMPAI TMAQDLGADR PSPRDPYGDH 60 IAEASRRFGV PIAWIRAVMR AESAGDPRAL SPKGAMGLMQ IMPPTWAGLR LRHRLGADPY 120 DPHDNIIAGA GYIRELFDRY GSPGWIAAYN AGPGRYEDSL KGRALPAETR AYVAIVAPSV 180 TSGDATWPIV AAAADALAWT RAPLFIAQAE RISIPVPVPA ERASDAAMTT SSVRDVSAIE 240 PQSGGLFVPR SGQRNAP |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11671 | mltC | 1.0e-10 | 61 | 164 | 124 | + murein transglycosylase C; Provisional | ||
| PRK11619 | PRK11619 | 2.0e-11 | 57 | 173 | 140 | + lytic murein transglycosylase; Provisional | ||
| COG0741 | MltE | 7.0e-21 | 56 | 187 | 138 | + Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane] | ||
| cd00254 | LT_GEWL | 6.0e-27 | 73 | 176 | 108 | + Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic "goose-type" lysozymes (GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. | ||
| pfam01464 | SLT | 5.0e-29 | 61 | 161 | 104 | + Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | YP_001415663.1 | 0 | 43 | 251 | 39 | 247 | lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2] |
| RefSeq | YP_001417769.1 | 0 | 1 | 254 | 1 | 255 | lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2] |
| RefSeq | YP_001417896.1 | 0 | 21 | 257 | 2 | 238 | lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2] |
| RefSeq | YP_001685447.1 | 0 | 43 | 254 | 95 | 307 | lytic transglycosylase catalytic [Caulobacter sp. K31] |
| RefSeq | YP_001925772.1 | 0 | 1 | 256 | 1 | 256 | Lytic transglycosylase catalytic [Methylobacterium populi BJ001] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qte_A | 0.000000002 | 57 | 183 | 453 | 586 | A Chain A, Crystal Structure Of The Pre-Mature Bacteriophage Phi29 Gene Product 12 |
| PDB | 1qsa_A | 0.000000002 | 57 | 183 | 453 | 586 | A Chain A, Crystal Structure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.65 Angstroms Resolution |
| PDB | 1sly_A | 0.00000004 | 57 | 183 | 453 | 586 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| PDB | 4hjv_E | 0.007 | 68 | 136 | 50 | 124 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| PDB | 4hjv_D | 0.007 | 68 | 136 | 50 | 124 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FE522940 | 52 | 54 | 105 | 0.0006 |
| EH222229 | 119 | 74 | 189 | 0.003 |
| HO351281 | 81 | 63 | 136 | 0.2 |
| HO599648 | 76 | 68 | 136 | 0.77 |
| FG600358 | 77 | 121 | 183 | 2.3 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Picea abies | MA_158766g0100 | MA_159146g0030 | MA_159036g0330 | ||
| Ricinus communis | 28599.m000063 | 30333.m000034 | 30692.m000027 | 33357.m000019 | |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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