| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_159036g0330 |
| Family | GH23 |
| Protein Properties | Length: 732 Molecular Weight: 79939.9 Isoelectric Point: 9.9602 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH23 | 577 | 708 | 2.2e-26 |
| AIVYAIARQESAFNPSVVSPAQAYGLMQVTPAAGKYVAKRHGATFDLARLKTDSAYNAAFGAAELGGLIEDYRGSYIMTFAGYNAGRGSVRKWIERYGDP RDPKVDAVDWVEQIPFSETRNYVQRIMENLQV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 732 Download |
| MPFAPSTAGS ARLLRWSAAL FGAGAIALVS YAASAVPLPK PRPISRQAPQ TAPAKPDQQK 60 APASATATPA APAPKALAAR PAPARKPSVA LALSSTSSTS KADMDTLEQI IDLVRKRKPA 120 DATQLQASLS DPVARKLSEW LILRSDDNGA PVERYRDFIA ENPSWPSVTF LRRRGEAALW 180 DDKRDDSTVL AFFNGEQPIS AKGRFMLARA LLARGDRASA ERLVREAWRG DPFSSDTEDT 240 AFERFGTLLT PGDIKIRMDM LLYSGDNAEA ALRSARRLGS GHVALAKARI ALNKKASNAK 300 ALLDAVPSDL HNDPLYLFSK AQWLRREDKF QEAARAMQAA PRDPARLVNA DEWWIERRLL 360 ARKLLDTNEP RLAYAVARDA SLPARDIYKT ESEFTAGWIA LRFLNDPNLA AQHFARIGVG 420 SVNPTALARA GYWQGRAAEA AGRPQEARNA YESAAAQSTS YYGQLARAKL GLPQIALNGV 480 PGRSRGGERL EVVRAVELLY ALDEREIAVP ILADMGERAD MDGLLALCEL TQRHNDARGM 540 LLVGKAALNR GMPFDHYAYP VIGIPPYKDF GPEVEKAIVY AIARQESAFN PSVVSPAQAY 600 GLMQVTPAAG KYVAKRHGAT FDLARLKTDS AYNAAFGAAE LGGLIEDYRG SYIMTFAGYN 660 AGRGSVRKWI ERYGDPRDPK VDAVDWVEQI PFSETRNYVQ RIMENLQVYR ARFGGGSKLL 720 IEADLRRGAG PE |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PHA00658 | PHA00658 | 2.0e-8 | 583 | 714 | 132 | + putative lysin | ||
| pfam01464 | SLT | 5.0e-17 | 572 | 675 | 104 | + Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. | ||
| PRK11619 | PRK11619 | 6.0e-20 | 581 | 727 | 149 | + lytic murein transglycosylase; Provisional | ||
| cd00254 | LT_GEWL | 1.0e-20 | 577 | 707 | 132 | + Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic "goose-type" lysozymes (GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. | ||
| COG0741 | MltE | 1.0e-27 | 429 | 715 | 295 | + Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_771713.1 | 0 | 71 | 730 | 165 | 818 | putative soluble lytic transglycosylase precursor [Bradyrhizobium japonicum USDA 110] |
| RefSeq | YP_001240629.1 | 0 | 23 | 729 | 34 | 765 | putative soluble lytic transglycosylase (SLT) [Bradyrhizobium sp. BTAi1] |
| RefSeq | YP_532757.1 | 0 | 18 | 732 | 27 | 747 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris BisB18] |
| RefSeq | YP_569546.1 | 0 | 2 | 732 | 6 | 746 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris BisB5] |
| RefSeq | YP_781550.1 | 0 | 28 | 732 | 69 | 772 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris BisA53] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1sly_A | 2e-17 | 551 | 720 | 439 | 609 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| PDB | 1qte_A | 3e-17 | 551 | 720 | 439 | 609 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| PDB | 1qsa_A | 3e-17 | 551 | 720 | 439 | 609 | A Chain A, Crystal Structure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.65 Angstroms Resolution |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
 | |||||
| Start | End | ||||
| 13 | 35 | ||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CV919804 | 96 | 101 | 196 | 1e-32 |
| FG600358 | 88 | 633 | 720 | 0.000007 |
| HO423184 | 125 | 594 | 710 | 0.001 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Picea abies | MA_158766g0100 | MA_158760g0070 | MA_159146g0030 | ||
| Ricinus communis | 28599.m000063 | 30333.m000034 | 30692.m000027 | 33357.m000019 | |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |