| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_159106g0030 |
| Family | GH24 |
| Protein Properties | Length: 158 Molecular Weight: 16958.7 Isoelectric Point: 10.038 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH24 | 19 | 150 | 4.90454e-44 |
| VPVVAQFEGLWLTAKVDTIGTGKPLTWCYGETEGPVKLGQRFTKIECDEMLAKKLPRYANEIAKCIKVDISDKTRAAFVSFAYNVGSSGFCKSTAARKLN AGDTRGACDALMAWNRAGGRVVRGLTNRRAKE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 158 Download |
| MTPAQRTGAA VAAVIAIAVP VVAQFEGLWL TAKVDTIGTG KPLTWCYGET EGPVKLGQRF 60 TKIECDEMLA KKLPRYANEI AKCIKVDISD KTRAAFVSFA YNVGSSGFCK STAARKLNAG 120 DTRGACDALM AWNRAGGRVV RGLTNRRAKE RAMCLEGI |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00959 | Phage_lysozyme | 2.0e-19 | 34 | 149 | 118 | + Phage lysozyme. This family includes lambda phage lysozyme and E. coli endolysin. | ||
| COG3772 | COG3772 | 2.0e-31 | 24 | 158 | 138 | + Phage-related lysozyme (muraminidase) [General function prediction only] | ||
| cd00737 | endolysin_autolysin | 6.0e-37 | 24 | 150 | 127 | + Endolysins and autolysins are found in viruses and bacteria, respectively. The ds DNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall hetropolymer peptidoglycan and cell division. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | YP_001755309.1 | 2e-35 | 12 | 158 | 51 | 196 | glycoside hydrolase family protein [Methylobacterium radiotolerans JCM 2831] |
| RefSeq | YP_003279594.1 | 5e-33 | 13 | 158 | 14 | 155 | glycoside hydrolase, family 24 [Comamonas testosteroni CNB-2] |
| RefSeq | ZP_05741211.1 | 1e-35 | 8 | 158 | 94 | 238 | lysozyme [Silicibacter sp. TrichCH4B] |
| RefSeq | ZP_05779186.1 | 6e-35 | 18 | 157 | 37 | 180 | lysozyme [Citreicella sp. SE45] |
| RefSeq | ZP_06361351.1 | 0 | 2 | 158 | 5 | 158 | glycoside hydrolase family 24 [Rhodopseudomonas palustris DX-1] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hdf_B | 1e-28 | 25 | 157 | 9 | 138 | A Chain A, Crystal Structure Of Truncated Endolysin R21 From Phage 21 |
| PDB | 3hdf_A | 1e-28 | 25 | 157 | 9 | 138 | A Chain A, Crystal Structure Of Truncated Endolysin R21 From Phage 21 |
| PDB | 3hde_D | 1e-28 | 25 | 157 | 34 | 163 | A Chain A, Crystal Structure Of Full-Length Endolysin R21 From Phage 21 |
| PDB | 3hde_C | 1e-28 | 25 | 157 | 34 | 163 | A Chain A, Crystal Structure Of Full-Length Endolysin R21 From Phage 21 |
| PDB | 3hde_B | 1e-28 | 25 | 157 | 34 | 163 | A Chain A, Crystal Structure Of Full-Length Endolysin R21 From Phage 21 |
