Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_159146g0030 |
Family | GH23 |
Protein Properties | Length: 314 Molecular Weight: 33892.8 Isoelectric Point: 9.8662 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH23 | 68 | 175 | 4.5e-25 |
EFFARVIWQESRFQPDAVGPMTRSGQRAQGVAQFMPGTASERRLLDPFDPVQALPKSAEFLQELREQFGNLGLAAAAYNAGPRRVQEWLAGTGYMPSETR NYVYAITG |
Full Sequence |
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Protein Sequence Length: 314 Download |
MKWRHLGKWL AVGVIVTLAA TLARADEPDD PPAAPAPAAA ATAKDGNTRE AMCLMIESAA 60 SAHGLPLEFF ARVIWQESRF QPDAVGPMTR SGQRAQGVAQ FMPGTASERR LLDPFDPVQA 120 LPKSAEFLQE LREQFGNLGL AAAAYNAGPR RVQEWLAGTG YMPSETRNYV YAITGTSVDD 180 WAAAGKSGAI KDRTPPAGCR ELMALLQRAP NPFVAELAQR VKLGAAMPWG VQLAAGFSRD 240 KALAMYARSM TRLSAIIGDR DPSLLSSIFR SRGTRPFYQV RVGADTRAAA NELCDRIRRA 300 GQACIVLKNA EQHG |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PHA00368 | PHA00368 | 0.001 | 55 | 131 | 81 | + internal virion protein D | ||
COG0741 | MltE | 0.001 | 55 | 170 | 137 | + Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane] | ||
pfam05036 | SPOR | 3.0e-6 | 228 | 308 | 82 | + Sporulation related domain. This 70 residue domain is composed of two 35 residue repeats found in proteins involved in sporulation and cell division such as FtsN, DedD, and CwlM. This domain is involved in binding peptidoglycan. Two tandem repeats fold into a pseudo-2-fold symmetric single-domain structure containing numerous contacts between the repeats. FtsN is an essential cell division protein with a simple bitopic topology, a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. These repeats lay at the periplasmic C-terminus. FtsN localises to the septum ring complex. | ||
pfam01464 | SLT | 4.0e-7 | 55 | 160 | 113 | + Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. | ||
cd00254 | LT_GEWL | 2.0e-12 | 68 | 173 | 113 | + Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic "goose-type" lysozymes (GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_948484.1 | 0 | 41 | 309 | 99 | 369 | transglycosylase SLT domain-containing protein [Rhodopseudomonas palustris CGA009] |
RefSeq | YP_486015.1 | 0 | 27 | 309 | 47 | 328 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris HaA2] |
RefSeq | YP_533182.1 | 0 | 24 | 314 | 53 | 341 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris BisB18] |
RefSeq | YP_570178.1 | 0 | 21 | 309 | 60 | 345 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris BisB5] |
RefSeq | ZP_06357936.1 | 0 | 23 | 314 | 3 | 292 | Lytic transglycosylase catalytic [Rhodopseudomonas palustris DX-1] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qte_A | 0.000003 | 55 | 170 | 456 | 588 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
PDB | 1qsa_A | 0.000003 | 55 | 170 | 456 | 588 | A Chain A, Crystal Structure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.65 Angstroms Resolution |
PDB | 1sly_A | 0.00004 | 55 | 170 | 456 | 588 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
Signal Peptide | |||||
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Cleavage Site | |||||
0 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO847897 | 34 | 54 | 87 | 3.9 |
Orthologous Group | |||||
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Species | ID | ||||
Picea abies | MA_158766g0100 | MA_158760g0070 | MA_159036g0330 | ||
Ricinus communis | 28599.m000063 | 30333.m000034 | 30692.m000027 | 33357.m000019 |
Sequence Alignments (This image is cropped. Click for full image.) |
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