| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000146624 |
| Family | CBM22 |
| Protein Properties | Length: 982 Molecular Weight: 108504 Isoelectric Point: 6.9011 |
| Chromosome | Chromosome/Scaffold: 002007152 Start: 3274 End: 8578 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 669 | 763 | 2.5e-25 |
| KQTQNSFPIGTCISRTNIDNEDYVDFFIKNFNWAVFGNELKWYWTEPQKGNFNYKDADEMVDLCKSHNIEMRGHCIFWEXIDTVQQWIRSLSQSD | |||
| GH10 | 768 | 905 | 6.1e-28 |
| DKLGKDIRANMFKNANQLXPSATLFVNXYHVEDXCDTRSSPEKYTDQILDLQQQGAPVGGIGIQGHIDSPVGPIVCTALDKLGILGLPIWFTELDVSSSN EYVRADDLEVMLREAFANPTVEGVMLWGFWELFMSREN | |||
| CBM22 | 64 | 190 | 6.6e-31 |
| NIVLNHDFSGGLHSWHXNHCNGFVVDSAGSYAVVTNRQQCWQGLEQDITGRISPGNTYXVSARVGVSGTLQGSADVLATLKLESRGSATSYMRIGRSSVS NGKWESLDGKFSLSTMPDRVXFYLEGP | |||
| CBM22 | 300 | 436 | 5e-33 |
| NIILNPNFEDALNNWSGRGCKIVLHDSMGDGKIVPQSGKVFAAATERTQSWNGIQQDITGRVQRKLAYEATAVVRIFGNNVTTAVVRATLWVQSPNQREQ YIGIANVQATDKDWTQLRGKFLLNGSPSKVVVYLEGP | |||
| CBM22 | 471 | 612 | 2.29953e-42 |
| NIIENSNLSNXTNGWFPLGNCTLSVTTGSPHILPPMARESLGPHEPLSGRYILVTKRTQTWMGPAQMIGDKLKLFLTYQVSAWVRIGAGATGPQNVNVAL SVDNQWVNGXQAEVSDTRWHEIGGSFRVEKQPSKVMVYIQGP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 982 Download |
| MRRLIAWCFR NRVSDSSNHP KQKHPEGSKE AMDKKNQQTN NNAADNVEFX RQNVADSSSS 60 RGPNIVLNHD FSGGLHSWHX NHCNGFVVDS AGSYAVVTNR QQCWQGLEQD ITGRISPGNT 120 YXVSARVGVS GTLQGSADVL ATLKLESRGS ATSYMRIGRS SVSNGKWESL DGKFSLSTMP 180 DRVXFYLEGP PAGVXLHIKS VVISCSEGQG SADVLATLKL EYRGSATNHL QVGRCSVSKG 240 RWGNLDGKFS LSTMPDRVVF YLEGPSPGVD LLIKSVLICS LSPNEWQSGS TGNFNDGEEN 300 IILNPNFEDA LNNWSGRGCK IVLHDSMGDG KIVPQSGKVF AAATERTQSW NGIQQDITGR 360 VQRKLAYEAT AVVRIFGNNV TTAVVRATLW VQSPNQREQY IGIANVQATD KDWTQLRGKF 420 LLNGSPSKVV VYLEGPLAGT DILVNSFVVK HAEKVPPSPP PVIEFSAFGV NIIENSNLSN 480 XTNGWFPLGN CTLSVTTGSP HILPPMARES LGPHEPLSGR YILVTKRTQT WMGPAQMIGD 540 KLKLFLTYQV SAWVRIGAGA TGPQNVNVAL SVDNQWVNGX QAEVSDTRWH EIGGSFRVEK 600 QPSKVMVYIQ GPAAGVDLMV AGLQIFPVDR PARFRHLKRQ TDKVRKCDIV LKFSGLDSSS 660 MLGTFVKVKQ TQNSFPIGTC ISRTNIDNED YVDFFIKNFN WAVFGNELKW YWTEPQKGNF 720 NYKDADEMVD LCKSHNIEMR GHCIFWEXID TVQQWIRSLS QSDLSTADKL GKDIRANMFK 780 NANQLXPSAT LFVNXYHVED XCDTRSSPEK YTDQILDLQQ QGAPVGGIGI QGHIDSPVGP 840 IVCTALDKLG ILGLPIWFTE LDVSSSNEYV RADDLEVMLR EAFANPTVEG VMLWGFWELF 900 MSRENSHLVN AEGDINEAGK RFLELKQEWL SHAHGHIDQQ GEFGFRGFPG TYSVEVFTAS 960 KKPAKTFVVD KGESPVEVSI AL |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 2.0e-14 | 470 | 614 | 151 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 5.0e-17 | 64 | 192 | 135 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 5.0e-23 | 683 | 896 | 267 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| smart00633 | Glyco_10 | 7.0e-56 | 708 | 922 | 268 | + Glycosyl hydrolase family 10. | ||
| pfam00331 | Glyco_hydro_10 | 8.0e-57 | 673 | 926 | 306 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002301133.1 | 0 | 52 | 206 | 152 | 317 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 6e-17 | 64 | 207 | 335 | 488 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 2.99878e-43 | 194 | 620 | 67 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 209 | 982 | 245 | 1049 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 299 | 625 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1e0v_A | 0.000000000000001 | 677 | 895 | 16 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 0.000000000000001 | 677 | 895 | 16 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 0.000000000000001 | 677 | 895 | 16 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0l_A | 0.000000000000001 | 677 | 895 | 16 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0k_A | 0.000000000000001 | 677 | 895 | 16 | 267 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EB442796 | 270 | 498 | 767 | 0 |
| FC863187 | 232 | 379 | 610 | 0 |
| EB442796 | 120 | 325 | 444 | 0.0000003 |
| EB442796 | 113 | 91 | 203 | 0.000001 |
| EB442796 | 121 | 163 | 278 | 0.74 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
