| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000201986 |
| Family | CBM43 |
| Protein Properties | Length: 503 Molecular Weight: 54760.6 Isoelectric Point: 7.3532 |
| Chromosome | Chromosome/Scaffold: 011988210 Start: 19716 End: 21508 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 368 | 445 | 1.6e-22 |
| WCVMSPDASTSDPNLAQSVNYACTYADCTSLGYGSSCGMLDAKSNASYAFNMYFQTMDQRKGACNFSGLSVTTNMDPT | |||
| GH17 | 31 | 348 | 0 |
| ACNWGTRSTHQLPPSIVVKLLKDNGFSKVKLFEADVGALQALGRSGIQVMVGIPNEFLAPLASSVTVAEKWVSQNVSSYISKNGVDIRYVAVGNEPFLQN YKDTFLHTTFPALQNIQAALIKAGLGRQVKVTIPLNADVYQTDSGLPSGGDFRADIHTLMMDIMKFLRDNNGVLTINIYPFLSLQADPDFPKEFAFFNNT AKPVVDGSISYTNVLDANFDTCIAALEKNGFSSLPVIVGEVGWPTDGDPNANIQDARRFNQGLVNRILAGQGTPKRSTAPEIYIFALIDEDAKSVLPGNF ERHWGMFNYDGSIKYPLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 503 Download |
| MGFHFQCLWI LLLCLTGEGL ARAVQGAGGL ACNWGTRSTH QLPPSIVVKL LKDNGFSKVK 60 LFEADVGALQ ALGRSGIQVM VGIPNEFLAP LASSVTVAEK WVSQNVSSYI SKNGVDIRYV 120 AVGNEPFLQN YKDTFLHTTF PALQNIQAAL IKAGLGRQVK VTIPLNADVY QTDSGLPSGG 180 DFRADIHTLM MDIMKFLRDN NGVLTINIYP FLSLQADPDF PKEFAFFNNT AKPVVDGSIS 240 YTNVLDANFD TCIAALEKNG FSSLPVIVGE VGWPTDGDPN ANIQDARRFN QGLVNRILAG 300 QGTPKRSTAP EIYIFALIDE DAKSVLPGNF ERHWGMFNYD GSIKYPLDTG SGKSLVPAKG 360 VRYLARQWCV MSPDASTSDP NLAQSVNYAC TYADCTSLGY GSSCGMLDAK SNASYAFNMY 420 FQTMDQRKGA CNFSGLSVTT NMDPTPTQNG QRSSCRFEIM IDLRKHEPAR RSPALPAAGL 480 REQSSYKVMM GLLVLVLVST LII |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-5 | 50 | 340 | 300 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-17 | 367 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-25 | 367 | 457 | 93 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-72 | 30 | 348 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 29 | 495 | 24 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197587.1 | 0 | 1 | 498 | 1 | 495 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277217.1 | 0 | 31 | 495 | 18 | 474 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 29 | 459 | 1 | 425 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516181.1 | 0 | 4 | 496 | 18 | 498 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 38 | 348 | 8 | 305 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1aq0_B | 0 | 38 | 348 | 8 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 38 | 348 | 8 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 1.96182e-44 | 34 | 337 | 5 | 300 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 9.94922e-44 | 40 | 348 | 11 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
