| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000235176 |
| Family | GT5 |
| Protein Properties | Length: 969 Molecular Weight: 109998 Isoelectric Point: 5.2021 |
| Chromosome | Chromosome/Scaffold: 000149357 Start: 5194 End: 11011 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 515 | 815 | 0 |
| HVVHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIILPKYDCMQYDRVPDLMALDVVLESYFDGRLFKNKVWVGTVEGLPVYFIEPLHPDKFFWRGQ FYGERDDFKRFSFFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSGRICFTCHNFEYQGTARASELASCGLDVHQLNRPDRMQDNSAH DRINAVKGAVVFSNIVTTVSPTYAQEVRTAEGGHGLHSTLNFHSKKFVGILNGIDADAWNPATDAYLKVQYRANDRQGKAENKEALRRILRLSSADVKRP L | |||
| GT5 | 817 | 958 | 0 |
| EFEGIASHFANHDHIRLILKYDDSLSHTIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDVDDDTVPLQFRNGYSFLTPDEQGLNGA MERAFDLYXNNPDXWQQLVQKVMNIDFSWDTSASQYEELYSK | |||
| Full Sequence |
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| Protein Sequence Length: 969 Download |
| MAVRLTTWFV TQGLTISGSN STSRHCSNSS SRFSFHCTPA SSCKLRHRXL SCYCVNKRQR 60 LKKKDSVEQS STTADFQLNG DDDSESENAS SAGVVVPIES VSDDEARTAN GDDSISTALT 120 PSDEANPSAY STQDLVDMIR NAEKNIHILN QARVNALEDL DKILGEKEAL QGEMNALEMR 180 LAETDARIRV AAQEKIKVEL LENQLDEMRN DLNLNSGGGV ERGQVEIFEN EXELFNEEAP 240 VPYRTSINAL VTNLNALRLE NQSLRSDVEA LREELSYVKN TDERVVMLEK QRSTLESALK 300 ELELKLSVSQ EDVSKLSNLK VECKGLWEKV ESLQLLLDKS TKQADQAITV LQQNQEIRKK 360 VDKLEESLET ANIYKESSEK MQQYNELMQQ KIKLMEDRLQ RSDEEIHSYV QLYQESVEEF 420 QDTLNTLKEE SKRRAVDEPV DDMPWEFWSR LLLMIDGWLF EKKISMDDAK VLREMVWKRD 480 RRLRDSYMAC KEKNVNEAVS TFLKLISSQT SPGLHVVHIA AEMAPVAKVG GLGDVVAGLG 540 KALQKKGHLV EIILPKYDCM QYDRVPDLMA LDVVLESYFD GRLFKNKVWV GTVEGLPVYF 600 IEPLHPDKFF WRGQFYGERD DFKRFSFFSR AALELLLQSG KKPDIIHCHD WQTAFVAPLY 660 WDLYAPKGLN SGRICFTCHN FEYQGTARAS ELASCGLDVH QLNRPDRMQD NSAHDRINAV 720 KGAVVFSNIV TTVSPTYAQE VRTAEGGHGL HSTLNFHSKK FVGILNGIDA DAWNPATDAY 780 LKVQYRANDR QGKAENKEAL RRILRLSSAD VKRPLREFEG IASHFANHDH IRLILKYDDS 840 LSHTIYAASD MFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDV DDDTVPLQFR 900 NGYSFLTPDE QGLNGAMERA FDLYXNNPDX WQQLVQKVMN IDFSWDTSAS QYEELYSKSV 960 ARARVAART |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 2.0e-104 | 512 | 956 | 492 | + synthase/transferase | ||
| PRK00654 | glgA | 1.0e-147 | 514 | 958 | 488 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-151 | 515 | 958 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 5.0e-155 | 514 | 959 | 488 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 0 | 40 | 959 | 974 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT09058.1 | 0 | 1 | 968 | 1 | 1000 | starch synthase IV precursor [Solanum lycopersicum] |
| RefSeq | NP_193558.3 | 0 | 275 | 969 | 303 | 1040 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 967 | 1 | 1009 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 128 | 967 | 28 | 885 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rzv_B | 0 | 514 | 963 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 0 | 514 | 963 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 0 | 514 | 963 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1rzu_A | 0 | 514 | 963 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3guh_A | 0 | 514 | 958 | 1 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EL448877 | 316 | 442 | 757 | 0 |
| CB893818 | 281 | 513 | 793 | 0 |
| EG664148 | 261 | 544 | 804 | 0 |
| CF828776 | 286 | 639 | 882 | 0 |
| GO851132 | 333 | 589 | 879 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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