| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000245498 |
| Family | CBM22 |
| Protein Properties | Length: 583 Molecular Weight: 65332.6 Isoelectric Point: 6.5668 |
| Chromosome | Chromosome/Scaffold: 021505201 Start: 8465 End: 11242 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM22 | 55 | 170 | 4.8e-22 |
| IIVNSELNDGLKGWSAFGNAKIQHRYSEGNKFIVAYGRNQPHDSISQKTYLHRNKLYTFSAWIQVSSGSAPVTAIFKTNSVFVHAGAIVAESGCWSMLKG GLTVNATGPAELYFES | |||
| GH10 | 229 | 493 | 0 |
| QKAAGFPFGVAINKNILTNTAYQNWFTSRPFTVTTFEDEMKWYSTEPSLGREDYSAADALLQFAKQHKIAVRGHNVFWDDPHYQPSWLNSLSGRQFSDAA YKRLTSVMGRYKGQVIAWDVCNENLHFNFFESKMGANASAEFYNWASKADGTTTLFLNDYNTIEESGDQDSTPAKYLQKLRDIQGFPGNENVKMAIGLES HFKTPNIPYIRSSIDTLAAAKVPIWITELDVESSPDQASYLEQILREVHAHPQIQGIVIWSAWKP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 583 Download |
| MKIRGKNILL VLLWAFAFAG IEVNCLSYDY TASIEASFPT ICLAKPHKPQ YRGGIIVNSE 60 LNDGLKGWSA FGNAKIQHRY SEGNKFIVAY GRNQPHDSIS QKTYLHRNKL YTFSAWIQVS 120 SGSAPVTAIF KTNSVFVHAG AIVAESGCWS MLKGGLTVNA TGPAELYFES KNASVGIFVD 180 SISLQPFTEK QWYSHQQQSI EKIRKTNVRV QAVDEQANPL ENATITIQQK AAGFPFGVAI 240 NKNILTNTAY QNWFTSRPFT VTTFEDEMKW YSTEPSLGRE DYSAADALLQ FAKQHKIAVR 300 GHNVFWDDPH YQPSWLNSLS GRQFSDAAYK RLTSVMGRYK GQVIAWDVCN ENLHFNFFES 360 KMGANASAEF YNWASKADGT TTLFLNDYNT IEESGDQDST PAKYLQKLRD IQGFPGNENV 420 KMAIGLESHF KTPNIPYIRS SIDTLAAAKV PIWITELDVE SSPDQASYLE QILREVHAHP 480 QIQGIVIWSA WKPWGCYRMC LTDNNFKNLP TGDVVDKLSH EFGLTSDEIF VTTDANGFFE 540 ASLFQGDYEV KITHPFVNSP LVSGLNVAPS VESPQQMQLQ VNV |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 3.0e-7 | 62 | 174 | 123 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 4.0e-33 | 229 | 510 | 314 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 6.0e-53 | 231 | 488 | 281 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 5.0e-75 | 268 | 515 | 273 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN10199.1 | 0 | 1 | 555 | 1 | 553 | endoxylanase [Carica papaya] |
| RefSeq | XP_002264556.1 | 0 | 24 | 583 | 108 | 656 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264605.1 | 0 | 18 | 583 | 17 | 572 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313180.1 | 0 | 42 | 554 | 3 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532418.1 | 0 | 20 | 579 | 15 | 566 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xas_A | 2e-29 | 223 | 488 | 3 | 266 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
| PDB | 1e0v_A | 2e-28 | 223 | 488 | 3 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 2e-28 | 223 | 488 | 3 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 2e-28 | 223 | 488 | 3 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0l_A | 2e-28 | 223 | 488 | 3 | 266 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
