| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000247204 |
| Family | CBM43 |
| Protein Properties | Length: 494 Molecular Weight: 54229.9 Isoelectric Point: 7.3538 |
| Chromosome | Chromosome/Scaffold: 002252329 Start: 28226 End: 30160 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 368 | 447 | 4.1e-26 |
| WCVAKPSGDLSDVANHMKLACSVADCTTLTYGGSCNGIGARGNISYAFNSYYQLQMQNERSCDFDGLGMVTFQDPSVGEC | |||
| GH17 | 29 | 347 | 0 |
| IGVNWGSVSFHRLKPSAVVDLMKDNKISKVKLFDADPDSLRALMGSGIQVMVGIPNEMLAALSSSTDASDLWVRQNVSRYMVKNGADIRYIAVGNEPFLT SYSGQFQSYVMPTLLNLQQSLAKVNLAGYVKLVVPCNADAYESSLPSQGAFRPELTQIMTQVVSFLYSNGSPFVVNIYPFLSLYGSSDFPQDYAFFEGTS HPVTDGSNVYSNAFDGNFDTLVAALSKLGYGQMPIXIGEVGWPTDGAINANLTAARVFNQGLINHVLSNRGTPLRPGAPPVDIYXFSLLDEXAKSTLPGN FERHWGIFSFDGQAKYPLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 494 Download |
| MLEARRKWSW AFAAALLSLV VVWRAESAIG VNWGSVSFHR LKPSAVVDLM KDNKISKVKL 60 FDADPDSLRA LMGSGIQVMV GIPNEMLAAL SSSTDASDLW VRQNVSRYMV KNGADIRYIA 120 VGNEPFLTSY SGQFQSYVMP TLLNLQQSLA KVNLAGYVKL VVPCNADAYE SSLPSQGAFR 180 PELTQIMTQV VSFLYSNGSP FVVNIYPFLS LYGSSDFPQD YAFFEGTSHP VTDGSNVYSN 240 AFDGNFDTLV AALSKLGYGQ MPIXIGEVGW PTDGAINANL TAARVFNQGL INHVLSNRGT 300 PLRPGAPPVD IYXFSLLDEX AKSTLPGNFE RHWGIFSFDG QAKYPLNLGL GSTGLKNARN 360 IEYLPSRWCV AKPSGDLSDV ANHMKLACSV ADCTTLTYGG SCNGIGARGN ISYAFNSYYQ 420 LQMQNERSCD FDGLGMVTFQ DPSVGECRFL VGVTDTTSRP RSRYSTSSSS CYQLNRRWII 480 VWMLISWGAW GFVM |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.003 | 202 | 339 | 142 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 8.0e-18 | 367 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-30 | 368 | 449 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-67 | 29 | 347 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB10499.1 | 0 | 15 | 465 | 38 | 487 | glucanase like protein [Arabidopsis thaliana] |
| EMBL | CAN82722.1 | 0 | 25 | 462 | 2 | 439 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_193451.2 | 0 | 15 | 465 | 11 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002329964.1 | 0 | 25 | 494 | 25 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525026.1 | 0 | 11 | 494 | 3 | 477 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 29 | 348 | 1 | 306 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 1aq0_B | 0 | 29 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 29 | 348 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 9.80909e-45 | 29 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 9.94922e-44 | 29 | 348 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
