| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000250491 |
| Family | GH17 |
| Protein Properties | Length: 515 Molecular Weight: 57733.6 Isoelectric Point: 9.4607 |
| Chromosome | Chromosome/Scaffold: 011987338 Start: 521 End: 5978 |
| Description | beta-1,3-glucanase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 198 | 509 | 0 |
| VGVCFPLKGTNLPPADRTAELLHKYKIPRTMVFAFNNSVMRSLRTLKPETSVAVMFPNEHLKSQDSVVRWWLSNYVDPYLNEVDINYIVVGDKAXQDNXA DVLRVMKAVRRVLDKKFLGRVKVTTLFDYDKTMNTPXPPSRATFIQKANNDISDILRFLRNQGAPLMVSVYPYXGYVHNXLSMHLDFALFKSKKPVLTDT FNVKYYNLLDAMVDAFYRAMERVGVSEVPIVIGEIGWPTAGGEHNVTTTQNAAIFNQNLLKHLXXRKGTPKKPQFAIEAYIRSLYDEKDKSIHXSYQSFG IFETNGNPKYPL | |||
| Full Sequence |
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| Protein Sequence Length: 515 Download |
| ALSRTNGLRS VSLAGYGRSS LSFGLQQRSA RLRVSCAAKP DTVEKVSKIV KKQLALPDDS 60 AVTGESKFSE LGADSLDTVE IVMGLEEEFG ISVEEESAQT IATVQDAADK LVQDXAVANL 120 KQQNLKRFLS SLDEYFEICV KFRDMCKRXS XGIQRPRLCF ANCELRITMG SSFVWAVVLV 180 VCAAATAAEA DTRSKSPVGV CFPLKGTNLP PADRTAELLH KYKIPRTMVF AFNNSVMRSL 240 RTLKPETSVA VMFPNEHLKS QDSVVRWWLS NYVDPYLNEV DINYIVVGDK AXQDNXADVL 300 RVMKAVRRVL DKKFLGRVKV TTLFDYDKTM NTPXPPSRAT FIQKANNDIS DILRFLRNQG 360 APLMVSVYPY XGYVHNXLSM HLDFALFKSK KPVLTDTFNV KYYNLLDAMV DAFYRAMERV 420 GVSEVPIVIG EIGWPTAGGE HNVTTTQNAA IFNQNLLKHL XXRKGTPKKP QFAIEAYIRS 480 LYDEKDKSIH XSYQSFGIFE TNGNPKYPLF KKSSN |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00171 | PTZ00171 | 1.0e-9 | 26 | 113 | 89 | + acyl carrier protein; Provisional | ||
| CHL00124 | acpP | 1.0e-11 | 39 | 109 | 72 | + acyl carrier protein; Validated | ||
| PRK00982 | acpP | 2.0e-13 | 39 | 109 | 72 | + acyl carrier protein; Provisional | ||
| TIGR00517 | acyl_carrier | 7.0e-15 | 41 | 109 | 69 | + acyl carrier protein. This small protein has phosphopantetheine covalently bound to a Ser residue. It acts as a carrier of the growing fatty acid chain, which is bound to the prosthetic group, during fatty acid biosynthesis. Homologous phosphopantetheine-binding domains are found in longer proteins. Acyl carrier proteins scoring above the noise cutoff but below the trusted cutoff may be specialized versions. These include those involved in mycolic acid biosynthesis in the Mycobacteria, lipid A biosynthesis in Rhizobium, actinorhodin polyketide synthesis in Streptomyces coelicolor, etc. This protein is not found in the Archaea.Gene name acpP.S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site [Fatty acid and phospholipid metabolism, Biosynthesis]. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-60 | 198 | 509 | 317 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0048037 | cofactor binding |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK23947.1 | 0 | 198 | 507 | 30 | 338 | unknown [Picea sitchensis] |
| GenBank | ACD45060.1 | 0 | 168 | 509 | 7 | 342 | beta-1,3-glucanase [Vitis riparia] |
| DDBJ | BAD93486.1 | 0 | 198 | 509 | 31 | 343 | pollen allergen CJP38 [Cryptomeria japonica] |
| DDBJ | BAF95876.1 | 0 | 168 | 509 | 7 | 342 | beta 1-3 glucanase [Vitis hybrid cultivar] |
| EMBL | CAA04768.1 | 0 | 1 | 109 | 22 | 130 | acyl carrier protein [Fragaria vesca] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 4.2039e-45 | 198 | 507 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 9.94922e-44 | 198 | 507 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 9.94922e-44 | 198 | 507 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 8.00001e-42 | 198 | 509 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 8.00001e-42 | 198 | 509 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO532902 | 157 | 1 | 148 | 0 |
| EB126404 | 154 | 1 | 148 | 0 |
| CV657370 | 109 | 1 | 109 | 0 |
| EB126372 | 163 | 1 | 157 | 0 |
| CV629705 | 109 | 1 | 109 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Cucumis sativus | Cucsa.141660.1 | ||||
| Malus domestica | MDP0000121690 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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