| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000276748 |
| Family | CBM43 |
| Protein Properties | Length: 483 Molecular Weight: 52578.4 Isoelectric Point: 7.9762 |
| Chromosome | Chromosome/Scaffold: 004490356 Start: 6826 End: 9260 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 366 | 445 | 2.2e-24 |
| WCVVNNNGDLSNATASASEACXHADCSAMSPGGSCSNISWPGNISYAFNSYYQQHNQSADSCDFGGLGLITTVNPSVDNC | |||
| GH17 | 22 | 346 | 0 |
| IGVNWGTTASHPLPPAKVVELLKSNNVTKVKLFDADPGVLGALSGSKLSVTVGIPNALLKSLNSSKKAAESWVHDNVTRYVSNGXGGGVKIEYVAVGDES FLQSYGEQFHPFVXGAAMNIHTALARAKLESNVKVVVPCSFDSFLSESGHPSKGHFRADLNRXMIXLLTFLSKHNSPFFATISPFXSLRQNKNISLDFTL FKDNAKPHNDSRKTYKNSFDLSYDTLVTALSTVGFPKMEIVVSQIGWPTDGAANATSSTAETFMKGLMAHLRSKSGTPLRPRNPPSETYVFSLLDEDQRS ISXGNFERHWGVFTFDGQAKYRFDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 483 Download |
| MPPNLCTLIF LLATTVSTCG SIGVNWGTTA SHPLPPAKVV ELLKSNNVTK VKLFDADPGV 60 LGALSGSKLS VTVGIPNALL KSLNSSKKAA ESWVHDNVTR YVSNGXGGGV KIEYVAVGDE 120 SFLQSYGEQF HPFVXGAAMN IHTALARAKL ESNVKVVVPC SFDSFLSESG HPSKGHFRAD 180 LNRXMIXLLT FLSKHNSPFF ATISPFXSLR QNKNISLDFT LFKDNAKPHN DSRKTYKNSF 240 DLSYDTLVTA LSTVGFPKME IVVSQIGWPT DGAANATSST AETFMKGLMA HLRSKSGTPL 300 RPRNPPSETY VFSLLDEDQR SISXGNFERH WGVFTFDGQA KYRFDFIQGS KNLVDAQNVE 360 YLPAKWCVVN NNGDLSNATA SASEACXHAD CSAMSPGGSC SNISWPGNIS YAFNSYYQQH 420 NQSADSCDFG GLGLITTVNP SVDNCRFSVQ LRTSLSDSFR PDYLSLXMTL LVTTLLLSLP 480 RFT |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0006 | 258 | 337 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-16 | 365 | 433 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-30 | 365 | 447 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-68 | 22 | 346 | 326 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 22 | 471 | 35 | 480 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI28434.1 | 0 | 1 | 479 | 1 | 481 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200656.2 | 0 | 12 | 464 | 16 | 461 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 21 | 476 | 25 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 18 | 477 | 18 | 476 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 21 | 346 | 1 | 315 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 3f55_C | 0 | 21 | 346 | 1 | 315 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 3f55_B | 0 | 21 | 346 | 1 | 315 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 3f55_A | 0 | 21 | 346 | 1 | 315 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 3em5_D | 0 | 21 | 346 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
